Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ndc1Q8VCB1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ndc1Q8VCB1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ndc1Q8VCB1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ndc1Q8VCB1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ndc1Q8VCB1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ndc1Q8VCB1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.38■□□□□ 0.37
Ndc1Q8VCB1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.38■□□□□ 0.37
Ndc1Q8VCB1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ndc1Q8VCB1 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.37■□□□□ 0.37
Ndc1Q8VCB1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ndc1Q8VCB1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ndc1Q8VCB1 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ndc1Q8VCB1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ndc1Q8VCB1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ndc1Q8VCB1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.37■□□□□ 0.37
Ndc1Q8VCB1 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ndc1Q8VCB1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.37■□□□□ 0.37
Ndc1Q8VCB1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ndc1Q8VCB1 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.37■□□□□ 0.37
Ndc1Q8VCB1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.37■□□□□ 0.37
Ndc1Q8VCB1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ndc1Q8VCB1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ndc1Q8VCB1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ndc1Q8VCB1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ndc1Q8VCB1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Gm37856-201ENSMUST00000191634 999 ntBASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ndc1Q8VCB1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ndc1Q8VCB1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ndc1Q8VCB1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ndc1Q8VCB1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ndc1Q8VCB1 Gm22240-201ENSMUST00000175225 82 ntBASIC17.35■□□□□ 0.37
Ndc1Q8VCB1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ndc1Q8VCB1 Gm8520-201ENSMUST00000186517 868 ntBASIC17.35■□□□□ 0.37
Ndc1Q8VCB1 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.35■□□□□ 0.37
Ndc1Q8VCB1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ndc1Q8VCB1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ndc1Q8VCB1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ndc1Q8VCB1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ndc1Q8VCB1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.35■□□□□ 0.37
Ndc1Q8VCB1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ndc1Q8VCB1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ndc1Q8VCB1 Golph3-205ENSMUST00000228671 2842 ntBASIC17.34■□□□□ 0.37
Ndc1Q8VCB1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ndc1Q8VCB1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
Ndc1Q8VCB1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ndc1Q8VCB1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.34■□□□□ 0.37
Ndc1Q8VCB1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ndc1Q8VCB1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ndc1Q8VCB1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Ndc1Q8VCB1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ndc1Q8VCB1 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ndc1Q8VCB1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ndc1Q8VCB1 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ndc1Q8VCB1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Ndc1Q8VCB1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ndc1Q8VCB1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ndc1Q8VCB1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ndc1Q8VCB1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ndc1Q8VCB1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Ndc1Q8VCB1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ndc1Q8VCB1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.36
Ndc1Q8VCB1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms