Protein–RNA interactions for Protein: Q8R4I4

Gtf2a1l, TFIIA-alpha and beta-like factor, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1lQ8R4I4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gtf2a1lQ8R4I4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gtf2a1lQ8R4I4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gtf2a1lQ8R4I4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gtf2a1lQ8R4I4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gtf2a1lQ8R4I4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gtf2a1lQ8R4I4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.04■□□□□ 0.48
Gtf2a1lQ8R4I4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gtf2a1lQ8R4I4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Gtf2a1lQ8R4I4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gtf2a1lQ8R4I4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gtf2a1lQ8R4I4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gtf2a1lQ8R4I4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gtf2a1lQ8R4I4 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Gtf2a1lQ8R4I4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gtf2a1lQ8R4I4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gtf2a1lQ8R4I4 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gtf2a1lQ8R4I4 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gtf2a1lQ8R4I4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gtf2a1lQ8R4I4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gtf2a1lQ8R4I4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gtf2a1lQ8R4I4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gtf2a1lQ8R4I4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Gtf2a1lQ8R4I4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gtf2a1lQ8R4I4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Gtf2a1lQ8R4I4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Gtf2a1lQ8R4I4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gtf2a1lQ8R4I4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Gtf2a1lQ8R4I4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gtf2a1lQ8R4I4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gtf2a1lQ8R4I4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
Gtf2a1lQ8R4I4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gtf2a1lQ8R4I4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gtf2a1lQ8R4I4 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Gtf2a1lQ8R4I4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.01■□□□□ 0.47
Gtf2a1lQ8R4I4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gtf2a1lQ8R4I4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gtf2a1lQ8R4I4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Gtf2a1lQ8R4I4 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.01■□□□□ 0.47
Gtf2a1lQ8R4I4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.01■□□□□ 0.47
Gtf2a1lQ8R4I4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Gm7856-201ENSMUST00000117514 1493 ntBASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Gtf2a1lQ8R4I4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gtf2a1lQ8R4I4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gtf2a1lQ8R4I4 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gtf2a1lQ8R4I4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gtf2a1lQ8R4I4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms