Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Treml1Q8K558 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Treml1Q8K558 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.19■□□□□ 0.5
Treml1Q8K558 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Treml1Q8K558 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Treml1Q8K558 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Treml1Q8K558 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Treml1Q8K558 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Treml1Q8K558 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Treml1Q8K558 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Treml1Q8K558 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.18■□□□□ 0.5
Treml1Q8K558 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Treml1Q8K558 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Treml1Q8K558 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.18■□□□□ 0.5
Treml1Q8K558 Mir5133-201ENSMUST00000174955 77 ntBASIC18.18■□□□□ 0.5
Treml1Q8K558 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Treml1Q8K558 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Treml1Q8K558 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Treml1Q8K558 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Treml1Q8K558 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Treml1Q8K558 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Treml1Q8K558 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Treml1Q8K558 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Treml1Q8K558 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Treml1Q8K558 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Treml1Q8K558 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Treml1Q8K558 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.17■□□□□ 0.5
Treml1Q8K558 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Treml1Q8K558 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Treml1Q8K558 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Treml1Q8K558 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Treml1Q8K558 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Treml1Q8K558 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Treml1Q8K558 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Treml1Q8K558 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Treml1Q8K558 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
Treml1Q8K558 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Treml1Q8K558 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Treml1Q8K558 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Treml1Q8K558 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Treml1Q8K558 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Treml1Q8K558 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Treml1Q8K558 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Treml1Q8K558 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.16■□□□□ 0.5
Treml1Q8K558 Gm10602-201ENSMUST00000098239 609 ntBASIC18.16■□□□□ 0.5
Treml1Q8K558 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Treml1Q8K558 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Treml1Q8K558 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.16■□□□□ 0.5
Treml1Q8K558 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Treml1Q8K558 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.16■□□□□ 0.5
Treml1Q8K558 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Treml1Q8K558 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Treml1Q8K558 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Treml1Q8K558 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Treml1Q8K558 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Treml1Q8K558 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Treml1Q8K558 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Treml1Q8K558 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Treml1Q8K558 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Treml1Q8K558 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Treml1Q8K558 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Treml1Q8K558 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Treml1Q8K558 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Treml1Q8K558 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Treml1Q8K558 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Treml1Q8K558 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Treml1Q8K558 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Treml1Q8K558 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Treml1Q8K558 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Treml1Q8K558 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Treml1Q8K558 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Treml1Q8K558 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Treml1Q8K558 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Treml1Q8K558 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Treml1Q8K558 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Treml1Q8K558 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Treml1Q8K558 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.14■□□□□ 0.49
Treml1Q8K558 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Treml1Q8K558 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.14■□□□□ 0.49
Treml1Q8K558 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Treml1Q8K558 Gm6211-202ENSMUST00000167849 925 ntBASIC18.14■□□□□ 0.49
Treml1Q8K558 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.14■□□□□ 0.49
Treml1Q8K558 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Treml1Q8K558 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Treml1Q8K558 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Treml1Q8K558 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Treml1Q8K558 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Treml1Q8K558 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Treml1Q8K558 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Treml1Q8K558 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Treml1Q8K558 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Treml1Q8K558 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.14■□□□□ 0.49
Treml1Q8K558 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Treml1Q8K558 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Treml1Q8K558 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.13■□□□□ 0.49
Treml1Q8K558 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Treml1Q8K558 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml1Q8K558 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.13■□□□□ 0.49
Treml1Q8K558 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Treml1Q8K558 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms