Protein–RNA interactions for Protein: Q8K2Y7

Mrpl47, 39S ribosomal protein L47, mitochondrial, mousemouse

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl47Q8K2Y7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Mrpl47Q8K2Y7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Mrpl47Q8K2Y7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mrpl47Q8K2Y7 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.33■□□□□ 0.52
Mrpl47Q8K2Y7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mrpl47Q8K2Y7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Mrpl47Q8K2Y7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Mrpl47Q8K2Y7 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Mrpl47Q8K2Y7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl47Q8K2Y7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl47Q8K2Y7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl47Q8K2Y7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl47Q8K2Y7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Mrpl47Q8K2Y7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl47Q8K2Y7 Gm12821-201ENSMUST00000120022 600 ntBASIC18.32■□□□□ 0.52
Mrpl47Q8K2Y7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.32■□□□□ 0.52
Mrpl47Q8K2Y7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl47Q8K2Y7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl47Q8K2Y7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Mrpl47Q8K2Y7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl47Q8K2Y7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl47Q8K2Y7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.32■□□□□ 0.52
Mrpl47Q8K2Y7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Mrpl47Q8K2Y7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 Rarb-207ENSMUST00000225921 2756 ntBASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Mrpl47Q8K2Y7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Mrpl47Q8K2Y7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl47Q8K2Y7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl47Q8K2Y7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl47Q8K2Y7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl47Q8K2Y7 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl47Q8K2Y7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl47Q8K2Y7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl47Q8K2Y7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl47Q8K2Y7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl47Q8K2Y7 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.29■□□□□ 0.52
Mrpl47Q8K2Y7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mrpl47Q8K2Y7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mrpl47Q8K2Y7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mrpl47Q8K2Y7 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mrpl47Q8K2Y7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mrpl47Q8K2Y7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mrpl47Q8K2Y7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mrpl47Q8K2Y7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms