Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Uba3Q8C878 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Uba3Q8C878 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.46■□□□□ 0.71
Uba3Q8C878 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.46■□□□□ 0.71
Uba3Q8C878 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Uba3Q8C878 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Uba3Q8C878 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Uba3Q8C878 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.46■□□□□ 0.71
Uba3Q8C878 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Uba3Q8C878 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Uba3Q8C878 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Uba3Q8C878 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Uba3Q8C878 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.46■□□□□ 0.71
Uba3Q8C878 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.46■□□□□ 0.71
Uba3Q8C878 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Uba3Q8C878 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Uba3Q8C878 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Uba3Q8C878 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Uba3Q8C878 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Uba3Q8C878 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Uba3Q8C878 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Uba3Q8C878 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.45■□□□□ 0.7
Uba3Q8C878 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Uba3Q8C878 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Uba3Q8C878 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Uba3Q8C878 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Uba3Q8C878 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Uba3Q8C878 Gm7290-201ENSMUST00000104990 617 ntBASIC19.45■□□□□ 0.7
Uba3Q8C878 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Uba3Q8C878 Gm13148-201ENSMUST00000118892 745 ntBASIC19.45■□□□□ 0.7
Uba3Q8C878 Gm12918-201ENSMUST00000120234 636 ntBASIC19.45■□□□□ 0.7
Uba3Q8C878 Gm15710-201ENSMUST00000121821 636 ntBASIC19.45■□□□□ 0.7
Uba3Q8C878 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.45■□□□□ 0.7
Uba3Q8C878 Gm5075-201ENSMUST00000196916 622 ntBASIC19.45■□□□□ 0.7
Uba3Q8C878 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Uba3Q8C878 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Uba3Q8C878 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Uba3Q8C878 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.45■□□□□ 0.7
Uba3Q8C878 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.45■□□□□ 0.7
Uba3Q8C878 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Uba3Q8C878 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Uba3Q8C878 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Uba3Q8C878 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Uba3Q8C878 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Uba3Q8C878 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Uba3Q8C878 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Uba3Q8C878 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Uba3Q8C878 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Uba3Q8C878 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Uba3Q8C878 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Uba3Q8C878 Gm12933-201ENSMUST00000120203 872 ntBASIC19.44■□□□□ 0.7
Uba3Q8C878 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Uba3Q8C878 Gm6211-202ENSMUST00000167849 925 ntBASIC19.44■□□□□ 0.7
Uba3Q8C878 Gm29257-201ENSMUST00000186115 639 ntBASIC19.44■□□□□ 0.7
Uba3Q8C878 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.44■□□□□ 0.7
Uba3Q8C878 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Uba3Q8C878 Gm10602-201ENSMUST00000098239 609 ntBASIC19.44■□□□□ 0.7
Uba3Q8C878 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.44■□□□□ 0.7
Uba3Q8C878 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Uba3Q8C878 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Uba3Q8C878 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Uba3Q8C878 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Uba3Q8C878 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Uba3Q8C878 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Uba3Q8C878 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Uba3Q8C878 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.43■□□□□ 0.7
Uba3Q8C878 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Uba3Q8C878 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Uba3Q8C878 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.43■□□□□ 0.7
Uba3Q8C878 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Uba3Q8C878 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.43■□□□□ 0.7
Uba3Q8C878 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.43■□□□□ 0.7
Uba3Q8C878 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Uba3Q8C878 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Uba3Q8C878 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Uba3Q8C878 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.43■□□□□ 0.7
Uba3Q8C878 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Uba3Q8C878 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Uba3Q8C878 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Uba3Q8C878 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.42■□□□□ 0.7
Uba3Q8C878 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Uba3Q8C878 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Uba3Q8C878 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Uba3Q8C878 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Uba3Q8C878 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Uba3Q8C878 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Uba3Q8C878 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.42■□□□□ 0.7
Uba3Q8C878 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Uba3Q8C878 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Uba3Q8C878 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.41■□□□□ 0.7
Uba3Q8C878 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Uba3Q8C878 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Uba3Q8C878 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.41■□□□□ 0.7
Uba3Q8C878 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Uba3Q8C878 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Uba3Q8C878 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Uba3Q8C878 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Uba3Q8C878 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.41■□□□□ 0.7
Uba3Q8C878 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Uba3Q8C878 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms