Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Cap2-205ENSMUST00000225824 1634 ntBASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Smco3Q8BQM7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smco3Q8BQM7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Smco3Q8BQM7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smco3Q8BQM7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco3Q8BQM7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.24■□□□□ 0.03
Smco3Q8BQM7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Smco3Q8BQM7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco3Q8BQM7 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Smco3Q8BQM7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco3Q8BQM7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.24■□□□□ 0.03
Smco3Q8BQM7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smco3Q8BQM7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.24■□□□□ 0.03
Smco3Q8BQM7 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.24■□□□□ 0.03
Smco3Q8BQM7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smco3Q8BQM7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco3Q8BQM7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smco3Q8BQM7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Smco3Q8BQM7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco3Q8BQM7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco3Q8BQM7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco3Q8BQM7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Smco3Q8BQM7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smco3Q8BQM7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Smco3Q8BQM7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco3Q8BQM7 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.23■□□□□ 0.03
Smco3Q8BQM7 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco3Q8BQM7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smco3Q8BQM7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco3Q8BQM7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smco3Q8BQM7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco3Q8BQM7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.23■□□□□ 0.03
Smco3Q8BQM7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Smco3Q8BQM7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco3Q8BQM7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smco3Q8BQM7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.22■□□□□ 0.03
Smco3Q8BQM7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smco3Q8BQM7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smco3Q8BQM7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smco3Q8BQM7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.21■□□□□ 0.03
Smco3Q8BQM7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.21■□□□□ 0.03
Smco3Q8BQM7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.21■□□□□ 0.03
Smco3Q8BQM7 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smco3Q8BQM7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smco3Q8BQM7 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smco3Q8BQM7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smco3Q8BQM7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smco3Q8BQM7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smco3Q8BQM7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms