Protein–RNA interactions for Protein: Q8BIF2

Rbfox3, RNA binding protein fox-1 homolog 3, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox3Q8BIF2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox3Q8BIF2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox3Q8BIF2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rbfox3Q8BIF2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Rbfox3Q8BIF2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox3Q8BIF2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox3Q8BIF2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.18□□□□□ -0.14
Rbfox3Q8BIF2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox3Q8BIF2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Rbfox3Q8BIF2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox3Q8BIF2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox3Q8BIF2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox3Q8BIF2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Rbfox3Q8BIF2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rbfox3Q8BIF2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Rbfox3Q8BIF2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Gm38205-201ENSMUST00000192243 258 ntBASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Gm5874-201ENSMUST00000096101 508 ntBASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Rbfox3Q8BIF2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Gm18671-201ENSMUST00000214826 683 ntBASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Reep4-203ENSMUST00000226563 1444 ntBASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Rbfox3Q8BIF2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Rbfox3Q8BIF2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rbfox3Q8BIF2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rbfox3Q8BIF2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox3Q8BIF2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox3Q8BIF2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rbfox3Q8BIF2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rbfox3Q8BIF2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Rbfox3Q8BIF2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms