Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn3bQ8BHK2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn3bQ8BHK2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn3bQ8BHK2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn3bQ8BHK2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn3bQ8BHK2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Scn3bQ8BHK2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn3bQ8BHK2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn3bQ8BHK2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Scn3bQ8BHK2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn3bQ8BHK2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn3bQ8BHK2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn3bQ8BHK2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn3bQ8BHK2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.17■□□□□ 0.34
Scn3bQ8BHK2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
Scn3bQ8BHK2 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.17■□□□□ 0.34
Scn3bQ8BHK2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
Scn3bQ8BHK2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Scn3bQ8BHK2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scn3bQ8BHK2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Scn3bQ8BHK2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Scn3bQ8BHK2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Scn3bQ8BHK2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scn3bQ8BHK2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn3bQ8BHK2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn3bQ8BHK2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn3bQ8BHK2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Scn3bQ8BHK2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms