Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx42Q810A7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx42Q810A7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx42Q810A7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx42Q810A7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx42Q810A7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx42Q810A7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.67■□□□□ 0.58
Ddx42Q810A7 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.67■□□□□ 0.58
Ddx42Q810A7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.67■□□□□ 0.58
Ddx42Q810A7 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.67■□□□□ 0.58
Ddx42Q810A7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx42Q810A7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx42Q810A7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Ddx42Q810A7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx42Q810A7 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx42Q810A7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx42Q810A7 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx42Q810A7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx42Q810A7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx42Q810A7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx42Q810A7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx42Q810A7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx42Q810A7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx42Q810A7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ddx42Q810A7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx42Q810A7 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx42Q810A7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx42Q810A7 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx42Q810A7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ddx42Q810A7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx42Q810A7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx42Q810A7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ddx42Q810A7 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx42Q810A7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ddx42Q810A7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx42Q810A7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx42Q810A7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ddx42Q810A7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx42Q810A7 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ddx42Q810A7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx42Q810A7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx42Q810A7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx42Q810A7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx42Q810A7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Ddx42Q810A7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx42Q810A7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx42Q810A7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx42Q810A7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx42Q810A7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx42Q810A7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ddx42Q810A7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx42Q810A7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx42Q810A7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Ddx42Q810A7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx42Q810A7 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.64■□□□□ 0.57
Ddx42Q810A7 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.64■□□□□ 0.57
Ddx42Q810A7 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.64■□□□□ 0.57
Ddx42Q810A7 Gm42569-201ENSMUST00000200539 472 ntBASIC18.64■□□□□ 0.57
Ddx42Q810A7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx42Q810A7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx42Q810A7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.64■□□□□ 0.57
Ddx42Q810A7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.64■□□□□ 0.57
Ddx42Q810A7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx42Q810A7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx42Q810A7 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.64■□□□□ 0.57
Ddx42Q810A7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ddx42Q810A7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx42Q810A7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx42Q810A7 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.63■□□□□ 0.57
Ddx42Q810A7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Ddx42Q810A7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.63■□□□□ 0.57
Ddx42Q810A7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx42Q810A7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ddx42Q810A7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx42Q810A7 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx42Q810A7 Gm7291-201ENSMUST00000199147 382 ntBASIC18.63■□□□□ 0.57
Ddx42Q810A7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.63■□□□□ 0.57
Ddx42Q810A7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx42Q810A7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx42Q810A7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ddx42Q810A7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx42Q810A7 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx42Q810A7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ddx42Q810A7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx42Q810A7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx42Q810A7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx42Q810A7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx42Q810A7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ddx42Q810A7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx42Q810A7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx42Q810A7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.62■□□□□ 0.57
Ddx42Q810A7 Smad6-203ENSMUST00000179458 273 ntBASIC18.62■□□□□ 0.57
Ddx42Q810A7 Gm42642-201ENSMUST00000200683 355 ntBASIC18.62■□□□□ 0.57
Ddx42Q810A7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx42Q810A7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx42Q810A7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx42Q810A7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ddx42Q810A7 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.62■□□□□ 0.57
Ddx42Q810A7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ddx42Q810A7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms