Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.07■□□□□ 0.8
Sh3tc2Q80VA5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3tc2Q80VA5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3tc2Q80VA5 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.07■□□□□ 0.8
Sh3tc2Q80VA5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3tc2Q80VA5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3tc2Q80VA5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3tc2Q80VA5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3tc2Q80VA5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sh3tc2Q80VA5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3tc2Q80VA5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.06■□□□□ 0.8
Sh3tc2Q80VA5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3tc2Q80VA5 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Sh3tc2Q80VA5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3tc2Q80VA5 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.06■□□□□ 0.8
Sh3tc2Q80VA5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Sh3tc2Q80VA5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.06■□□□□ 0.8
Sh3tc2Q80VA5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3tc2Q80VA5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3tc2Q80VA5 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3tc2Q80VA5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3tc2Q80VA5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sh3tc2Q80VA5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3tc2Q80VA5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3tc2Q80VA5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3tc2Q80VA5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3tc2Q80VA5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3tc2Q80VA5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Sh3tc2Q80VA5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
Sh3tc2Q80VA5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Sh3tc2Q80VA5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3tc2Q80VA5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3tc2Q80VA5 Gm15378-201ENSMUST00000121894 207 ntBASIC20.05■□□□□ 0.8
Sh3tc2Q80VA5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Sh3tc2Q80VA5 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3tc2Q80VA5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3tc2Q80VA5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.05■□□□□ 0.8
Sh3tc2Q80VA5 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sh3tc2Q80VA5 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3tc2Q80VA5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3tc2Q80VA5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3tc2Q80VA5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.04■□□□□ 0.8
Sh3tc2Q80VA5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.04■□□□□ 0.8
Sh3tc2Q80VA5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.04■□□□□ 0.8
Sh3tc2Q80VA5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3tc2Q80VA5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.04■□□□□ 0.8
Sh3tc2Q80VA5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3tc2Q80VA5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3tc2Q80VA5 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3tc2Q80VA5 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.04■□□□□ 0.8
Sh3tc2Q80VA5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3tc2Q80VA5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Sh3tc2Q80VA5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3tc2Q80VA5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3tc2Q80VA5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Sh3tc2Q80VA5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3tc2Q80VA5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3tc2Q80VA5 Mir1199-201ENSMUST00000117015 119 ntBASIC20.03■□□□□ 0.8
Sh3tc2Q80VA5 Gm11643-201ENSMUST00000119578 864 ntBASIC20.03■□□□□ 0.8
Sh3tc2Q80VA5 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3tc2Q80VA5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.03■□□□□ 0.8
Sh3tc2Q80VA5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3tc2Q80VA5 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3tc2Q80VA5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3tc2Q80VA5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Sh3tc2Q80VA5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3tc2Q80VA5 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3tc2Q80VA5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3tc2Q80VA5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3tc2Q80VA5 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3tc2Q80VA5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
Sh3tc2Q80VA5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3tc2Q80VA5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.02■□□□□ 0.8
Sh3tc2Q80VA5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3tc2Q80VA5 Gm9987-201ENSMUST00000069768 567 ntBASIC20.02■□□□□ 0.8
Sh3tc2Q80VA5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3tc2Q80VA5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3tc2Q80VA5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Sh3tc2Q80VA5 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Sh3tc2Q80VA5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sh3tc2Q80VA5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.02■□□□□ 0.79
Sh3tc2Q80VA5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Sh3tc2Q80VA5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3tc2Q80VA5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Sh3tc2Q80VA5 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.01■□□□□ 0.79
Sh3tc2Q80VA5 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.01■□□□□ 0.79
Sh3tc2Q80VA5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3tc2Q80VA5 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.01■□□□□ 0.79
Sh3tc2Q80VA5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.01■□□□□ 0.79
Sh3tc2Q80VA5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3tc2Q80VA5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sh3tc2Q80VA5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3tc2Q80VA5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sh3tc2Q80VA5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20■□□□□ 0.79
Sh3tc2Q80VA5 AC153881.2-201ENSMUST00000214877 204 ntBASIC20■□□□□ 0.79
Sh3tc2Q80VA5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3tc2Q80VA5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20■□□□□ 0.79
Sh3tc2Q80VA5 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Sh3tc2Q80VA5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20■□□□□ 0.79
Sh3tc2Q80VA5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms