Protein–RNA interactions for Protein: Q7TNM2

Trim46, Tripartite motif-containing protein 46, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim46Q7TNM2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim46Q7TNM2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Grk6-206ENSMUST00000224995 2971 ntBASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Gm18671-201ENSMUST00000214826 683 ntBASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim46Q7TNM2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim46Q7TNM2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim46Q7TNM2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim46Q7TNM2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim46Q7TNM2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim46Q7TNM2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim46Q7TNM2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trim46Q7TNM2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
Trim46Q7TNM2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim46Q7TNM2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
Trim46Q7TNM2 Gm18284-201ENSMUST00000172604 624 ntBASIC17.29■□□□□ 0.36
Trim46Q7TNM2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
Trim46Q7TNM2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim46Q7TNM2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.29■□□□□ 0.36
Trim46Q7TNM2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim46Q7TNM2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Trim46Q7TNM2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim46Q7TNM2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim46Q7TNM2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim46Q7TNM2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trim46Q7TNM2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim46Q7TNM2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim46Q7TNM2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim46Q7TNM2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim46Q7TNM2 Gm7514-201ENSMUST00000209475 934 ntBASIC17.28■□□□□ 0.36
Trim46Q7TNM2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim46Q7TNM2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim46Q7TNM2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim46Q7TNM2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.28■□□□□ 0.36
Trim46Q7TNM2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim46Q7TNM2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim46Q7TNM2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim46Q7TNM2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim46Q7TNM2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim46Q7TNM2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim46Q7TNM2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim46Q7TNM2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.27■□□□□ 0.36
Trim46Q7TNM2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim46Q7TNM2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim46Q7TNM2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim46Q7TNM2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim46Q7TNM2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Trim46Q7TNM2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trim46Q7TNM2 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms