Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.98■□□□□ 0.47
Scn4bQ7M729 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4bQ7M729 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4bQ7M729 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4bQ7M729 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4bQ7M729 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.97■□□□□ 0.47
Scn4bQ7M729 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4bQ7M729 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Scn4bQ7M729 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.97■□□□□ 0.47
Scn4bQ7M729 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
Scn4bQ7M729 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4bQ7M729 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4bQ7M729 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4bQ7M729 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.97■□□□□ 0.47
Scn4bQ7M729 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4bQ7M729 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4bQ7M729 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4bQ7M729 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.96■□□□□ 0.47
Scn4bQ7M729 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.96■□□□□ 0.47
Scn4bQ7M729 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4bQ7M729 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4bQ7M729 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.96■□□□□ 0.47
Scn4bQ7M729 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4bQ7M729 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.96■□□□□ 0.47
Scn4bQ7M729 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.96■□□□□ 0.47
Scn4bQ7M729 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4bQ7M729 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4bQ7M729 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4bQ7M729 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4bQ7M729 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4bQ7M729 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4bQ7M729 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4bQ7M729 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4bQ7M729 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4bQ7M729 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Scn4bQ7M729 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Scn4bQ7M729 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Scn4bQ7M729 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Scn4bQ7M729 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Scn4bQ7M729 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn4bQ7M729 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Scn4bQ7M729 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Scn4bQ7M729 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Scn4bQ7M729 Gm6420-201ENSMUST00000193885 723 ntBASIC17.94■□□□□ 0.46
Scn4bQ7M729 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.94■□□□□ 0.46
Scn4bQ7M729 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn4bQ7M729 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn4bQ7M729 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn4bQ7M729 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn4bQ7M729 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn4bQ7M729 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.93■□□□□ 0.46
Scn4bQ7M729 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn4bQ7M729 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.93■□□□□ 0.46
Scn4bQ7M729 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Scn4bQ7M729 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn4bQ7M729 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn4bQ7M729 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Scn4bQ7M729 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn4bQ7M729 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Scn4bQ7M729 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Scn4bQ7M729 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.92■□□□□ 0.46
Scn4bQ7M729 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Scn4bQ7M729 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn4bQ7M729 AV356131-201ENSMUST00000206201 750 ntBASIC17.92■□□□□ 0.46
Scn4bQ7M729 Gm7514-201ENSMUST00000209475 934 ntBASIC17.92■□□□□ 0.46
Scn4bQ7M729 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn4bQ7M729 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn4bQ7M729 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn4bQ7M729 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
Scn4bQ7M729 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn4bQ7M729 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn4bQ7M729 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.92■□□□□ 0.46
Scn4bQ7M729 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn4bQ7M729 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Scn4bQ7M729 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Scn4bQ7M729 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Scn4bQ7M729 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Scn4bQ7M729 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn4bQ7M729 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn4bQ7M729 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.91■□□□□ 0.46
Scn4bQ7M729 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn4bQ7M729 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn4bQ7M729 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn4bQ7M729 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn4bQ7M729 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn4bQ7M729 Nespas-201ENSMUST00000143738 1083 ntBASIC17.91■□□□□ 0.46
Scn4bQ7M729 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn4bQ7M729 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn4bQ7M729 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scn4bQ7M729 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn4bQ7M729 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Scn4bQ7M729 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scn4bQ7M729 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scn4bQ7M729 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Scn4bQ7M729 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn4bQ7M729 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn4bQ7M729 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.9■□□□□ 0.46
Scn4bQ7M729 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn4bQ7M729 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scn4bQ7M729 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms