Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ParpbpQ6IRT3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ParpbpQ6IRT3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ParpbpQ6IRT3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ParpbpQ6IRT3 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ParpbpQ6IRT3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ParpbpQ6IRT3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ParpbpQ6IRT3 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ParpbpQ6IRT3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.29■□□□□ 0.36
ParpbpQ6IRT3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ParpbpQ6IRT3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.29■□□□□ 0.36
ParpbpQ6IRT3 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.29■□□□□ 0.36
ParpbpQ6IRT3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ParpbpQ6IRT3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ParpbpQ6IRT3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ParpbpQ6IRT3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ParpbpQ6IRT3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ParpbpQ6IRT3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ParpbpQ6IRT3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ParpbpQ6IRT3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ParpbpQ6IRT3 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ParpbpQ6IRT3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ParpbpQ6IRT3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ParpbpQ6IRT3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.27■□□□□ 0.36
ParpbpQ6IRT3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ParpbpQ6IRT3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ParpbpQ6IRT3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ParpbpQ6IRT3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ParpbpQ6IRT3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ParpbpQ6IRT3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
ParpbpQ6IRT3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ParpbpQ6IRT3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ParpbpQ6IRT3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.27■□□□□ 0.35
ParpbpQ6IRT3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ParpbpQ6IRT3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
ParpbpQ6IRT3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
ParpbpQ6IRT3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Gm13534-201ENSMUST00000121169 513 ntBASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Nespas-201ENSMUST00000143738 1083 ntBASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ParpbpQ6IRT3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ParpbpQ6IRT3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ParpbpQ6IRT3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ParpbpQ6IRT3 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.25■□□□□ 0.35
ParpbpQ6IRT3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ParpbpQ6IRT3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ParpbpQ6IRT3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ParpbpQ6IRT3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ParpbpQ6IRT3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms