Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-4Q5R1I0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-4Q5R1I0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-4Q5R1I0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav6d-4Q5R1I0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav6d-4Q5R1I0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6d-4Q5R1I0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6d-4Q5R1I0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6d-4Q5R1I0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6d-4Q5R1I0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6d-4Q5R1I0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.52■□□□□ 0.08
Trav6d-4Q5R1I0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6d-4Q5R1I0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav6d-4Q5R1I0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6d-4Q5R1I0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6d-4Q5R1I0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav6d-4Q5R1I0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-4Q5R1I0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-4Q5R1I0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav6d-4Q5R1I0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-4Q5R1I0 Gm10653-202ENSMUST00000139570 835 ntBASIC15.51■□□□□ 0.07
Trav6d-4Q5R1I0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-4Q5R1I0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-4Q5R1I0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.51■□□□□ 0.07
Trav6d-4Q5R1I0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav6d-4Q5R1I0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav6d-4Q5R1I0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-4Q5R1I0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav6d-4Q5R1I0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Trav6d-4Q5R1I0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-4Q5R1I0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-4Q5R1I0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-4Q5R1I0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.5■□□□□ 0.07
Trav6d-4Q5R1I0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-4Q5R1I0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-4Q5R1I0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-4Q5R1I0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav6d-4Q5R1I0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav6d-4Q5R1I0 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav6d-4Q5R1I0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-4Q5R1I0 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.5■□□□□ 0.07
Trav6d-4Q5R1I0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav6d-4Q5R1I0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-4Q5R1I0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav6d-4Q5R1I0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Gm44549-201ENSMUST00000208351 577 ntBASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav6d-4Q5R1I0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
Trav6d-4Q5R1I0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-4Q5R1I0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-4Q5R1I0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav6d-4Q5R1I0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav6d-4Q5R1I0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav6d-4Q5R1I0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav6d-4Q5R1I0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Trav6d-4Q5R1I0 Gm20760-201ENSMUST00000179197 648 ntBASIC15.47■□□□□ 0.07
Trav6d-4Q5R1I0 Gm2559-201ENSMUST00000201323 363 ntBASIC15.47■□□□□ 0.07
Trav6d-4Q5R1I0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-4Q5R1I0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-4Q5R1I0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-4Q5R1I0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-4Q5R1I0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-4Q5R1I0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav6d-4Q5R1I0 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms