Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gm6311-201ENSMUST00000073790 878 ntBASIC13.4□□□□□ -0.26
Cks1brtQ3UNC9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1brtQ3UNC9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1brtQ3UNC9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1brtQ3UNC9 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1brtQ3UNC9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Cks1brtQ3UNC9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1brtQ3UNC9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cks1brtQ3UNC9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.4□□□□□ -0.27
Cks1brtQ3UNC9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Gm28536-201ENSMUST00000190971 1317 ntBASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cks1brtQ3UNC9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Gm16437-201ENSMUST00000025669 507 ntBASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cks1brtQ3UNC9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Cks1brtQ3UNC9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1brtQ3UNC9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1brtQ3UNC9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1brtQ3UNC9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1brtQ3UNC9 Gm9806-201ENSMUST00000051080 552 ntBASIC13.37□□□□□ -0.27
Cks1brtQ3UNC9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1brtQ3UNC9 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1brtQ3UNC9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cks1brtQ3UNC9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC13.36□□□□□ -0.27
Cks1brtQ3UNC9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Scarna2-201ENSMUST00000157560 414 ntBASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cks1brtQ3UNC9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms