Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
Ebf1Q07802 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf1Q07802 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ebf1Q07802 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.65■□□□□ 0.58
Ebf1Q07802 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ebf1Q07802 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf1Q07802 Gm715-201ENSMUST00000117865 831 ntBASIC18.64■□□□□ 0.57
Ebf1Q07802 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf1Q07802 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.64■□□□□ 0.57
Ebf1Q07802 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf1Q07802 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf1Q07802 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf1Q07802 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ebf1Q07802 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf1Q07802 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ebf1Q07802 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
Ebf1Q07802 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Ebf1Q07802 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.63■□□□□ 0.57
Ebf1Q07802 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf1Q07802 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf1Q07802 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf1Q07802 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ebf1Q07802 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf1Q07802 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf1Q07802 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf1Q07802 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.63■□□□□ 0.57
Ebf1Q07802 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.63■□□□□ 0.57
Ebf1Q07802 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.63■□□□□ 0.57
Ebf1Q07802 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf1Q07802 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf1Q07802 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ebf1Q07802 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf1Q07802 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf1Q07802 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf1Q07802 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf1Q07802 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ebf1Q07802 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ebf1Q07802 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf1Q07802 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ebf1Q07802 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf1Q07802 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf1Q07802 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf1Q07802 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf1Q07802 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf1Q07802 Gm11249-201ENSMUST00000117071 859 ntBASIC18.62■□□□□ 0.57
Ebf1Q07802 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ebf1Q07802 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf1Q07802 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.62■□□□□ 0.57
Ebf1Q07802 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ebf1Q07802 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf1Q07802 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf1Q07802 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf1Q07802 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.61■□□□□ 0.57
Ebf1Q07802 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf1Q07802 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf1Q07802 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.61■□□□□ 0.57
Ebf1Q07802 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.61■□□□□ 0.57
Ebf1Q07802 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf1Q07802 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Ebf1Q07802 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf1Q07802 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf1Q07802 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf1Q07802 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf1Q07802 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ebf1Q07802 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf1Q07802 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf1Q07802 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ebf1Q07802 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf1Q07802 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf1Q07802 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf1Q07802 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf1Q07802 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf1Q07802 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf1Q07802 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ebf1Q07802 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf1Q07802 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf1Q07802 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf1Q07802 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf1Q07802 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf1Q07802 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf1Q07802 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ebf1Q07802 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.59■□□□□ 0.57
Ebf1Q07802 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.59■□□□□ 0.57
Ebf1Q07802 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf1Q07802 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf1Q07802 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf1Q07802 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.59■□□□□ 0.57
Ebf1Q07802 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.59■□□□□ 0.57
Ebf1Q07802 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.59■□□□□ 0.57
Ebf1Q07802 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.59■□□□□ 0.57
Ebf1Q07802 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf1Q07802 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf1Q07802 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ebf1Q07802 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Ebf1Q07802 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ebf1Q07802 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ebf1Q07802 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ebf1Q07802 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.59■□□□□ 0.57
Ebf1Q07802 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.59■□□□□ 0.57
Ebf1Q07802 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms