Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 COG7YGL005C 840 nt3.08□□□□□ -1.92
RPN9Q04062 YJL047C-AYJL047C-A 135 nt3.08□□□□□ -1.92
RPN9Q04062 RPL17AYKL180W 555 nt3.08□□□□□ -1.92
RPN9Q04062 YLR154C-HYLR154C-H 132 nt3.08□□□□□ -1.92
RPN9Q04062 YLR156C-AYLR156C-A 132 nt3.08□□□□□ -1.92
RPN9Q04062 YLR157C-CYLR157C-C 132 nt3.08□□□□□ -1.92
RPN9Q04062 YLR159C-AYLR159C-A 132 nt3.08□□□□□ -1.92
RPN9Q04062 YLR307C-AYLR307C-A 264 nt3.08□□□□□ -1.92
RPN9Q04062 ILV5YLR355C 1188 nt3.08□□□□□ -1.92
RPN9Q04062 MRPL16YBL038W 699 nt3.08□□□□□ -1.92
RPN9Q04062 YBR201C-AYBR201C-A 204 nt3.08□□□□□ -1.92
RPN9Q04062 TGL3YMR313C 1929 nt3.08□□□□□ -1.92
RPN9Q04062 GYL1YMR192W 2163 nt3.08□□□□□ -1.92
RPN9Q04062 CCT7YJL111W 1653 nt3.08□□□□□ -1.92
RPN9Q04062 CDH1YGL003C 1701 nt3.07□□□□□ -1.92
RPN9Q04062 RGC1YPR115W 3252 nt3.07□□□□□ -1.92
RPN9Q04062 TVP15YDR100W 432 nt3.07□□□□□ -1.92
RPN9Q04062 RTT105YER104W 627 nt3.07□□□□□ -1.92
RPN9Q04062 RPA12YJR063W 378 nt3.07□□□□□ -1.92
RPN9Q04062 ENV10YLR065C 546 nt3.07□□□□□ -1.92
RPN9Q04062 YBL039W-BYBL039W-B 180 nt3.07□□□□□ -1.92
RPN9Q04062 YMR294W-AYMR294W-A 360 nt3.07□□□□□ -1.92
RPN9Q04062 END3YNL084C 1050 nt3.07□□□□□ -1.92
RPN9Q04062 YBR090CYBR090C 369 nt3.07□□□□□ -1.92
RPN9Q04062 YBR300CYBR300C 498 nt3.07□□□□□ -1.92
RPN9Q04062 MET10YFR030W 3108 nt3.07□□□□□ -1.92
RPN9Q04062 MPS1YDL028C 2295 nt3.07□□□□□ -1.92
RPN9Q04062 YAT2YER024W 2772 nt3.06□□□□□ -1.92
RPN9Q04062 snR68snR68 136 nt3.06□□□□□ -1.92
RPN9Q04062 HTB1YDR224C 396 nt3.06□□□□□ -1.92
RPN9Q04062 MUS81YDR386W 1899 nt3.06□□□□□ -1.92
RPN9Q04062 UTP5YDR398W 1932 nt3.06□□□□□ -1.92
RPN9Q04062 YDR442WYDR442W 393 nt3.06□□□□□ -1.92
RPN9Q04062 NDT80YHR124W 1884 nt3.06□□□□□ -1.92
RPN9Q04062 MNT3YIL014W 1893 nt3.06□□□□□ -1.92
RPN9Q04062 YJL049WYJL049W 1353 nt3.06□□□□□ -1.92
RPN9Q04062 YKL065W-AYKL065W-A 222 nt3.06□□□□□ -1.92
RPN9Q04062 TSR4YOL022C 1227 nt3.06□□□□□ -1.92
RPN9Q04062 YOL114CYOL114C 609 nt3.06□□□□□ -1.92
RPN9Q04062 THI80YOR143C 960 nt3.06□□□□□ -1.92
RPN9Q04062 LTP1YPR073C 486 nt3.06□□□□□ -1.92
RPN9Q04062 SAG1YJR004C 1953 nt3.05□□□□□ -1.92
RPN9Q04062 SRP68YPL243W 1800 nt3.05□□□□□ -1.92
RPN9Q04062 PIG2YIL045W 1617 nt3.05□□□□□ -1.92
RPN9Q04062 SNQ2YDR011W 4506 nt3.05□□□□□ -1.92
RPN9Q04062 tQ(UUG)BtQ(UUG)B 72 nt3.05□□□□□ -1.92
RPN9Q04062 EFG1YGR271C-A 702 nt3.05□□□□□ -1.92
RPN9Q04062 CTK2YJL006C 972 nt3.05□□□□□ -1.92
RPN9Q04062 RPL15AYLR029C 615 nt3.05□□□□□ -1.92
RPN9Q04062 RUF5-1RUF5-1 710 nt3.05□□□□□ -1.92
RPN9Q04062 RUF5-2RUF5-2 710 nt3.05□□□□□ -1.92
RPN9Q04062 HUA2YOR284W 732 nt3.05□□□□□ -1.92
RPN9Q04062 CHO2YGR157W 2610 nt3.05□□□□□ -1.92
RPN9Q04062 SRC1YML034W 2505 nt3.04□□□□□ -1.92
RPN9Q04062 EPL1YFL024C 2499 nt3.04□□□□□ -1.92
RPN9Q04062 21S_rRNA21S_rRNA 3296 nt3.04□□□□□ -1.92
RPN9Q04062 BCH1YMR237W 2175 nt3.04□□□□□ -1.92
RPN9Q04062 TFC1YBR123C 1950 nt3.04□□□□□ -1.92
RPN9Q04062 ERP3YDL018C 678 nt3.04□□□□□ -1.92
RPN9Q04062 YFH7YFR007W 1062 nt3.04□□□□□ -1.92
RPN9Q04062 RPB9YGL070C 369 nt3.04□□□□□ -1.92
RPN9Q04062 IKI1YHR187W 930 nt3.04□□□□□ -1.92
RPN9Q04062 ERG20YJL167W 1059 nt3.04□□□□□ -1.92
RPN9Q04062 GPX1YKL026C 504 nt3.04□□□□□ -1.92
RPN9Q04062 APC9YLR102C 798 nt3.04□□□□□ -1.92
RPN9Q04062 SFH1YLR321C 1281 nt3.04□□□□□ -1.92
RPN9Q04062 YNL276CYNL276C 396 nt3.04□□□□□ -1.92
RPN9Q04062 TPT1YOL102C 693 nt3.04□□□□□ -1.92
RPN9Q04062 SMC2YFR031C 3513 nt3.04□□□□□ -1.92
RPN9Q04062 FAA2YER015W 2235 nt3.04□□□□□ -1.92
RPN9Q04062 STP2YHR006W 1626 nt3.04□□□□□ -1.92
RPN9Q04062 BNI4YNL233W 2679 nt3.03□□□□□ -1.92
RPN9Q04062 CIK1YMR198W 1785 nt3.03□□□□□ -1.92
RPN9Q04062 YNL011CYNL011C 1335 nt3.03□□□□□ -1.92
RPN9Q04062 MIX14YDR031W 366 nt3.03□□□□□ -1.92
RPN9Q04062 MIG2YGL209W 1149 nt3.03□□□□□ -1.92
RPN9Q04062 YKL091CYKL091C 933 nt3.03□□□□□ -1.92
RPN9Q04062 YLR076CYLR076C 423 nt3.03□□□□□ -1.92
RPN9Q04062 RPS30AYLR287C-A 192 nt3.03□□□□□ -1.92
RPN9Q04062 BUD21YOR078W 645 nt3.03□□□□□ -1.92
RPN9Q04062 IPP1YBR011C 864 nt3.03□□□□□ -1.92
RPN9Q04062 YPR027CYPR027C 834 nt3.03□□□□□ -1.92
RPN9Q04062 SLM4YBR077C 489 nt3.03□□□□□ -1.92
RPN9Q04062 CSR2YPR030W 3366 nt3.03□□□□□ -1.92
RPN9Q04062 TIF4631YGR162W 2859 nt3.03□□□□□ -1.92
RPN9Q04062 PEX6YNL329C 3093 nt3.03□□□□□ -1.92
RPN9Q04062 TAO3YIL129C 7131 nt3.02□□□□□ -1.93
RPN9Q04062 TRM82YDR165W 1335 nt3.02□□□□□ -1.93
RPN9Q04062 YER165C-AYER165C-A 357 nt3.02□□□□□ -1.93
RPN9Q04062 YGR107WYGR107W 450 nt3.02□□□□□ -1.93
RPN9Q04062 RSM27YGR215W 333 nt3.02□□□□□ -1.93
RPN9Q04062 YHL002C-AYHL002C-A 489 nt3.02□□□□□ -1.93
RPN9Q04062 YJL114WYJL114W 681 nt3.02□□□□□ -1.93
RPN9Q04062 SPR2YOR214C 711 nt3.02□□□□□ -1.93
RPN9Q04062 TSC11YER093C 4293 nt3.02□□□□□ -1.93
RPN9Q04062 POL4YCR014C 1749 nt3.02□□□□□ -1.93
RPN9Q04062 AVT5YBL089W 1380 nt3.01□□□□□ -1.93
RPN9Q04062 DIA2YOR080W 2199 nt3.01□□□□□ -1.93
RPN9Q04062 TOM70YNL121C 1854 nt3.01□□□□□ -1.93
RPN9Q04062 YDR170W-AYDR170W-A 1323 nt3.01□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 38.1 ms