Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Crnkl1P63154 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Crnkl1P63154 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Crnkl1P63154 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Crnkl1P63154 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Crnkl1P63154 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Crnkl1P63154 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Crnkl1P63154 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.24■□□□□ 0.51
Crnkl1P63154 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Crnkl1P63154 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.24■□□□□ 0.51
Crnkl1P63154 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Crnkl1P63154 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Crnkl1P63154 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Crnkl1P63154 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Crnkl1P63154 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Crnkl1P63154 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Crnkl1P63154 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Crnkl1P63154 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Crnkl1P63154 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Crnkl1P63154 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Crnkl1P63154 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Crnkl1P63154 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Crnkl1P63154 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Crnkl1P63154 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.23■□□□□ 0.51
Crnkl1P63154 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Crnkl1P63154 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Crnkl1P63154 Gm43530-201ENSMUST00000195920 274 ntBASIC18.23■□□□□ 0.51
Crnkl1P63154 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.23■□□□□ 0.51
Crnkl1P63154 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Crnkl1P63154 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Crnkl1P63154 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Crnkl1P63154 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Crnkl1P63154 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Crnkl1P63154 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Crnkl1P63154 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Crnkl1P63154 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Crnkl1P63154 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Crnkl1P63154 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Crnkl1P63154 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Crnkl1P63154 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Crnkl1P63154 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Crnkl1P63154 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Crnkl1P63154 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Crnkl1P63154 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Crnkl1P63154 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Crnkl1P63154 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.22■□□□□ 0.51
Crnkl1P63154 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Crnkl1P63154 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Crnkl1P63154 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Crnkl1P63154 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Crnkl1P63154 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Crnkl1P63154 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Crnkl1P63154 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Crnkl1P63154 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Crnkl1P63154 Gm12821-201ENSMUST00000120022 600 ntBASIC18.21■□□□□ 0.51
Crnkl1P63154 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.21■□□□□ 0.51
Crnkl1P63154 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Crnkl1P63154 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Crnkl1P63154 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.21■□□□□ 0.51
Crnkl1P63154 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Crnkl1P63154 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Crnkl1P63154 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Crnkl1P63154 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Crnkl1P63154 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Crnkl1P63154 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Crnkl1P63154 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Crnkl1P63154 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Crnkl1P63154 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.2■□□□□ 0.5
Crnkl1P63154 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Crnkl1P63154 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Crnkl1P63154 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Crnkl1P63154 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Crnkl1P63154 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.19■□□□□ 0.5
Crnkl1P63154 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Crnkl1P63154 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Crnkl1P63154 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Crnkl1P63154 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Crnkl1P63154 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Crnkl1P63154 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.19■□□□□ 0.5
Crnkl1P63154 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.19■□□□□ 0.5
Crnkl1P63154 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.19■□□□□ 0.5
Crnkl1P63154 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.19■□□□□ 0.5
Crnkl1P63154 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Crnkl1P63154 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms