Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ThraP63058 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ThraP63058 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ThraP63058 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ThraP63058 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ThraP63058 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ThraP63058 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ThraP63058 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ThraP63058 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ThraP63058 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ThraP63058 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ThraP63058 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.61■□□□□ 0.57
ThraP63058 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ThraP63058 Gm12441-201ENSMUST00000121806 588 ntBASIC18.61■□□□□ 0.57
ThraP63058 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
ThraP63058 Rarb-207ENSMUST00000225921 2756 ntBASIC18.61■□□□□ 0.57
ThraP63058 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ThraP63058 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ThraP63058 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ThraP63058 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ThraP63058 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ThraP63058 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ThraP63058 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ThraP63058 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ThraP63058 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ThraP63058 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ThraP63058 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ThraP63058 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ThraP63058 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.6■□□□□ 0.57
ThraP63058 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.6■□□□□ 0.57
ThraP63058 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ThraP63058 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.6■□□□□ 0.57
ThraP63058 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.6■□□□□ 0.57
ThraP63058 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ThraP63058 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.6■□□□□ 0.57
ThraP63058 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
ThraP63058 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ThraP63058 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ThraP63058 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ThraP63058 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
ThraP63058 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ThraP63058 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ThraP63058 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ThraP63058 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ThraP63058 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ThraP63058 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ThraP63058 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ThraP63058 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.59■□□□□ 0.57
ThraP63058 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ThraP63058 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ThraP63058 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.59■□□□□ 0.57
ThraP63058 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ThraP63058 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ThraP63058 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ThraP63058 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
ThraP63058 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.58■□□□□ 0.57
ThraP63058 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ThraP63058 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ThraP63058 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ThraP63058 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ThraP63058 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ThraP63058 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ThraP63058 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ThraP63058 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ThraP63058 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ThraP63058 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ThraP63058 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.58■□□□□ 0.56
ThraP63058 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ThraP63058 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ThraP63058 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ThraP63058 Grk6-206ENSMUST00000224995 2971 ntBASIC18.57■□□□□ 0.56
ThraP63058 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ThraP63058 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ThraP63058 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ThraP63058 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.57■□□□□ 0.56
ThraP63058 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ThraP63058 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ThraP63058 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ThraP63058 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ThraP63058 Gm4968-201ENSMUST00000071458 858 ntBASIC18.57■□□□□ 0.56
ThraP63058 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
ThraP63058 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ThraP63058 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ThraP63058 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.57■□□□□ 0.56
ThraP63058 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ThraP63058 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ThraP63058 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ThraP63058 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ThraP63058 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.56■□□□□ 0.56
ThraP63058 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ThraP63058 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ThraP63058 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ThraP63058 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ThraP63058 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ThraP63058 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.56■□□□□ 0.56
ThraP63058 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ThraP63058 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.56■□□□□ 0.56
ThraP63058 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ThraP63058 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ThraP63058 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms