Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.18■□□□□ 0.18
Lsm6P62313 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm6P62313 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.18■□□□□ 0.18
Lsm6P62313 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Lsm6P62313 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.18■□□□□ 0.18
Lsm6P62313 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm6P62313 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lsm6P62313 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm6P62313 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm6P62313 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm6P62313 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm6P62313 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm6P62313 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.17■□□□□ 0.18
Lsm6P62313 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.17■□□□□ 0.18
Lsm6P62313 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Lsm6P62313 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm6P62313 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm6P62313 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm6P62313 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm6P62313 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm6P62313 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm6P62313 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Lsm6P62313 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm6P62313 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Lsm6P62313 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Lsm6P62313 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm6P62313 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm6P62313 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm6P62313 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm6P62313 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.16■□□□□ 0.18
Lsm6P62313 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.16■□□□□ 0.18
Lsm6P62313 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm6P62313 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Lsm6P62313 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm6P62313 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm6P62313 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lsm6P62313 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm6P62313 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm6P62313 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Lsm6P62313 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm6P62313 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm6P62313 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm6P62313 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Lsm6P62313 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm6P62313 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm6P62313 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm6P62313 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm6P62313 Gm18284-201ENSMUST00000172604 624 ntBASIC16.15■□□□□ 0.18
Lsm6P62313 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.15■□□□□ 0.18
Lsm6P62313 Gm7514-201ENSMUST00000209475 934 ntBASIC16.15■□□□□ 0.18
Lsm6P62313 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm6P62313 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm6P62313 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm6P62313 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm6P62313 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm6P62313 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm6P62313 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Lsm6P62313 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm6P62313 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm6P62313 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.14■□□□□ 0.17
Lsm6P62313 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm6P62313 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm6P62313 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Lsm6P62313 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.14■□□□□ 0.17
Lsm6P62313 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Lsm6P62313 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
Lsm6P62313 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm6P62313 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.17
Lsm6P62313 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm6P62313 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm6P62313 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.14■□□□□ 0.17
Lsm6P62313 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
Lsm6P62313 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm6P62313 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm6P62313 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm6P62313 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm6P62313 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Lsm6P62313 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm6P62313 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.13■□□□□ 0.17
Lsm6P62313 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Lsm6P62313 Gm6420-201ENSMUST00000193885 723 ntBASIC16.13■□□□□ 0.17
Lsm6P62313 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm6P62313 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm6P62313 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.13■□□□□ 0.17
Lsm6P62313 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm6P62313 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm6P62313 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm6P62313 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Lsm6P62313 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm6P62313 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm6P62313 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm6P62313 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm6P62313 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm6P62313 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm6P62313 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm6P62313 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm6P62313 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm6P62313 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm6P62313 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Lsm6P62313 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms