Protein–RNA interactions for Protein: P50479

PDLIM4, PDZ and LIM domain protein 4, humanhuman

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4P50479 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM4P50479 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM4P50479 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PDLIM4P50479 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM4P50479 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM4P50479 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PDLIM4P50479 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.82■□□□□ 0.44
PDLIM4P50479 GUSBP6-202ENST00000438529 1198 ntBASIC17.82■□□□□ 0.44
PDLIM4P50479 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM4P50479 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.82■□□□□ 0.44
PDLIM4P50479 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.82■□□□□ 0.44
PDLIM4P50479 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM4P50479 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM4P50479 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM4P50479 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM4P50479 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDLIM4P50479 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PDLIM4P50479 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.81■□□□□ 0.44
PDLIM4P50479 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 ABHD17AP1-201ENST00000358206 933 ntBASIC17.81■□□□□ 0.44
PDLIM4P50479 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.81■□□□□ 0.44
PDLIM4P50479 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 POU5F1P4-201ENST00000413175 1085 ntBASIC17.81■□□□□ 0.44
PDLIM4P50479 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.81■□□□□ 0.44
PDLIM4P50479 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.81■□□□□ 0.44
PDLIM4P50479 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
PDLIM4P50479 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 AC127496.7-201ENST00000625110 1798 ntBASIC17.81■□□□□ 0.44
PDLIM4P50479 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDLIM4P50479 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM4P50479 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM4P50479 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM4P50479 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.8■□□□□ 0.44
PDLIM4P50479 AC007375.3-201ENST00000600936 2314 ntBASIC17.8■□□□□ 0.44
PDLIM4P50479 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM4P50479 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.8■□□□□ 0.44
PDLIM4P50479 KRT18P6-201ENST00000555540 1265 ntBASIC17.8■□□□□ 0.44
PDLIM4P50479 AL138781.1-201ENST00000566567 1274 ntBASIC17.8■□□□□ 0.44
PDLIM4P50479 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PDLIM4P50479 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.8■□□□□ 0.44
PDLIM4P50479 AC008694.1-202ENST00000636953 945 ntBASIC17.8■□□□□ 0.44
PDLIM4P50479 AC133041.1-202ENST00000642053 222 ntBASIC17.8■□□□□ 0.44
PDLIM4P50479 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM4P50479 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM4P50479 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
PDLIM4P50479 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
PDLIM4P50479 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM4P50479 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM4P50479 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM4P50479 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDLIM4P50479 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM4P50479 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM4P50479 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM4P50479 AC087742.1-201ENST00000575880 1738 ntBASIC17.79■□□□□ 0.44
PDLIM4P50479 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.79■□□□□ 0.44
PDLIM4P50479 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.79■□□□□ 0.44
PDLIM4P50479 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.79■□□□□ 0.44
PDLIM4P50479 AC007322.4-201ENST00000509611 723 ntBASIC17.79■□□□□ 0.44
PDLIM4P50479 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM4P50479 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM4P50479 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.79■□□□□ 0.44
PDLIM4P50479 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PDLIM4P50479 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM4P50479 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM4P50479 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM4P50479 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.79■□□□□ 0.44
PDLIM4P50479 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM4P50479 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
PDLIM4P50479 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.78■□□□□ 0.44
PDLIM4P50479 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM4P50479 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM4P50479 CYP2T1P-201ENST00000432607 1285 ntBASIC17.78■□□□□ 0.44
PDLIM4P50479 AC069152.1-201ENST00000438030 544 ntBASIC17.78■□□□□ 0.44
PDLIM4P50479 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM4P50479 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.78■□□□□ 0.44
PDLIM4P50479 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM4P50479 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.78■□□□□ 0.44
PDLIM4P50479 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
PDLIM4P50479 AC069236.1-201ENST00000604339 616 ntBASIC17.78■□□□□ 0.44
PDLIM4P50479 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PDLIM4P50479 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM4P50479 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM4P50479 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.78■□□□□ 0.44
PDLIM4P50479 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM4P50479 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM4P50479 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM4P50479 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms