Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Xcl1P47993 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Xcl1P47993 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Xcl1P47993 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Xcl1P47993 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.12□□□□□ -0.47
Xcl1P47993 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Xcl1P47993 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.12□□□□□ -0.47
Xcl1P47993 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Xcl1P47993 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Xcl1P47993 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Xcl1P47993 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Xcl1P47993 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Xcl1P47993 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Xcl1P47993 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Xcl1P47993 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Xcl1P47993 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.12□□□□□ -0.47
Xcl1P47993 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Xcl1P47993 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Xcl1P47993 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Xcl1P47993 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Xcl1P47993 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Xcl1P47993 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Xcl1P47993 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Xcl1P47993 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Xcl1P47993 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Xcl1P47993 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Xcl1P47993 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Xcl1P47993 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Xcl1P47993 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Xcl1P47993 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Xcl1P47993 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Xcl1P47993 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC12.11□□□□□ -0.47
Xcl1P47993 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC12.11□□□□□ -0.47
Xcl1P47993 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Xcl1P47993 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Xcl1P47993 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Xcl1P47993 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Xcl1P47993 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Xcl1P47993 Gm37352-201ENSMUST00000193908 2181 ntBASIC12.11□□□□□ -0.47
Xcl1P47993 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC12.1□□□□□ -0.47
Xcl1P47993 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Xcl1P47993 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Xcl1P47993 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.1□□□□□ -0.47
Xcl1P47993 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Xcl1P47993 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.09□□□□□ -0.47
Xcl1P47993 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Xcl1P47993 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Xcl1P47993 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Xcl1P47993 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Xcl1P47993 Gm45640-201ENSMUST00000210665 1896 ntBASIC12.08□□□□□ -0.48
Xcl1P47993 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xcl1P47993 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Xcl1P47993 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Xcl1P47993 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xcl1P47993 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Xcl1P47993 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Xcl1P47993 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xcl1P47993 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Xcl1P47993 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Xcl1P47993 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xcl1P47993 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Xcl1P47993 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Xcl1P47993 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms