Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-6P43688 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-6P43688 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-6P43688 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Nkx2-6P43688 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Nkx2-6P43688 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.43■□□□□ 0.38
Nkx2-6P43688 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-6P43688 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-6P43688 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-6P43688 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-6P43688 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-6P43688 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-6P43688 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx2-6P43688 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.43■□□□□ 0.38
Nkx2-6P43688 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Nkx2-6P43688 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-6P43688 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-6P43688 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-6P43688 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-6P43688 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-6P43688 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.42■□□□□ 0.38
Nkx2-6P43688 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Nkx2-6P43688 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-6P43688 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-6P43688 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-6P43688 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-6P43688 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Nkx2-6P43688 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-6P43688 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-6P43688 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx2-6P43688 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-6P43688 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx2-6P43688 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-6P43688 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-6P43688 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-6P43688 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-6P43688 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-6P43688 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-6P43688 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-6P43688 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Nkx2-6P43688 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-6P43688 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-6P43688 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-6P43688 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-6P43688 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.4■□□□□ 0.38
Nkx2-6P43688 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx2-6P43688 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-6P43688 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-6P43688 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.39■□□□□ 0.37
Nkx2-6P43688 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-6P43688 Gm6576-201ENSMUST00000169678 883 ntBASIC17.39■□□□□ 0.37
Nkx2-6P43688 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.39■□□□□ 0.37
Nkx2-6P43688 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-6P43688 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx2-6P43688 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nkx2-6P43688 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-6P43688 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-6P43688 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-6P43688 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-6P43688 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-6P43688 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.38■□□□□ 0.37
Nkx2-6P43688 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.38■□□□□ 0.37
Nkx2-6P43688 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.38■□□□□ 0.37
Nkx2-6P43688 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nkx2-6P43688 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nkx2-6P43688 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.38■□□□□ 0.37
Nkx2-6P43688 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-6P43688 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-6P43688 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-6P43688 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx2-6P43688 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.38■□□□□ 0.37
Nkx2-6P43688 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.37■□□□□ 0.37
Nkx2-6P43688 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms