Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
KDM5CP41229 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC31.85■■■□□ 2.69
KDM5CP41229 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC31.84■■■□□ 2.69
KDM5CP41229 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
KDM5CP41229 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC31.84■■■□□ 2.69
KDM5CP41229 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC31.84■■■□□ 2.69
KDM5CP41229 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
KDM5CP41229 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
KDM5CP41229 C1QBPP2-201ENST00000528754 825 ntBASIC31.84■■■□□ 2.69
KDM5CP41229 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
KDM5CP41229 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
KDM5CP41229 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC31.83■■■□□ 2.69
KDM5CP41229 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
KDM5CP41229 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
KDM5CP41229 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC31.83■■■□□ 2.69
KDM5CP41229 FAM197Y4-202ENST00000622692 608 ntBASIC31.83■■■□□ 2.69
KDM5CP41229 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
KDM5CP41229 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
KDM5CP41229 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC31.82■■■□□ 2.69
KDM5CP41229 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.69
KDM5CP41229 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
KDM5CP41229 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC31.82■■■□□ 2.68
KDM5CP41229 FAM210CP-201ENST00000445714 574 ntBASIC31.82■■■□□ 2.68
KDM5CP41229 SNORA78-201ENST00000459373 127 ntBASIC31.82■■■□□ 2.68
KDM5CP41229 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC31.82■■■□□ 2.68
KDM5CP41229 SLC29A4P2-201ENST00000504749 1089 ntBASIC31.82■■■□□ 2.68
KDM5CP41229 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
KDM5CP41229 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
KDM5CP41229 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC31.82■■■□□ 2.68
KDM5CP41229 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
KDM5CP41229 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
KDM5CP41229 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
KDM5CP41229 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
KDM5CP41229 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
KDM5CP41229 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC31.82■■■□□ 2.68
KDM5CP41229 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
KDM5CP41229 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
KDM5CP41229 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC31.81■■■□□ 2.68
KDM5CP41229 RPS20-210ENST00000523936 899 ntTSL 2 BASIC31.81■■■□□ 2.68
KDM5CP41229 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
KDM5CP41229 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC31.81■■■□□ 2.68
KDM5CP41229 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
KDM5CP41229 RARG-204ENST00000543726 1779 ntTSL 2 BASIC31.8■■■□□ 2.68
KDM5CP41229 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC31.8■■■□□ 2.68
KDM5CP41229 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC31.8■■■□□ 2.68
KDM5CP41229 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
KDM5CP41229 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
KDM5CP41229 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
KDM5CP41229 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
KDM5CP41229 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC31.79■■■□□ 2.68
KDM5CP41229 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC31.79■■■□□ 2.68
KDM5CP41229 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC31.79■■■□□ 2.68
KDM5CP41229 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
KDM5CP41229 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC31.79■■■□□ 2.68
KDM5CP41229 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
KDM5CP41229 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
KDM5CP41229 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC31.78■■■□□ 2.68
KDM5CP41229 AC012618.2-201ENST00000428058 849 ntBASIC31.78■■■□□ 2.68
KDM5CP41229 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
KDM5CP41229 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
KDM5CP41229 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC31.78■■■□□ 2.68
KDM5CP41229 Z99916.2-201ENST00000604037 246 ntBASIC31.78■■■□□ 2.68
KDM5CP41229 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
KDM5CP41229 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
KDM5CP41229 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
KDM5CP41229 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC31.77■■■□□ 2.68
KDM5CP41229 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
KDM5CP41229 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
KDM5CP41229 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC31.77■■■□□ 2.68
KDM5CP41229 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
KDM5CP41229 AC137767.1-201ENST00000602918 1920 ntBASIC31.76■■■□□ 2.68
KDM5CP41229 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
KDM5CP41229 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
KDM5CP41229 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
KDM5CP41229 AC010331.1-201ENST00000611423 582 ntBASIC31.76■■■□□ 2.67
KDM5CP41229 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
KDM5CP41229 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
KDM5CP41229 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
KDM5CP41229 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC31.75■■■□□ 2.67
KDM5CP41229 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
KDM5CP41229 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
KDM5CP41229 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
KDM5CP41229 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC31.75■■■□□ 2.67
KDM5CP41229 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC31.75■■■□□ 2.67
KDM5CP41229 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
KDM5CP41229 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
KDM5CP41229 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
KDM5CP41229 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC31.74■■■□□ 2.67
KDM5CP41229 LINC01023-201ENST00000606054 436 ntBASIC31.74■■■□□ 2.67
KDM5CP41229 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
KDM5CP41229 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
KDM5CP41229 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC31.74■■■□□ 2.67
KDM5CP41229 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
KDM5CP41229 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC31.74■■■□□ 2.67
KDM5CP41229 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
KDM5CP41229 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC31.73■■■□□ 2.67
KDM5CP41229 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
KDM5CP41229 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
KDM5CP41229 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
KDM5CP41229 MIR1224-201ENST00000408193 85 ntBASIC31.73■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms