Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cdh4P39038 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Cdh4P39038 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh4P39038 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh4P39038 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh4P39038 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cdh4P39038 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.64■□□□□ 0.41
Cdh4P39038 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.64■□□□□ 0.41
Cdh4P39038 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.64■□□□□ 0.41
Cdh4P39038 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.64■□□□□ 0.41
Cdh4P39038 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh4P39038 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh4P39038 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh4P39038 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Cdh4P39038 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh4P39038 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh4P39038 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdh4P39038 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh4P39038 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh4P39038 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh4P39038 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cdh4P39038 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh4P39038 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh4P39038 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh4P39038 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh4P39038 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdh4P39038 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cdh4P39038 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh4P39038 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cdh4P39038 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh4P39038 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh4P39038 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh4P39038 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh4P39038 Gm29257-201ENSMUST00000186115 639 ntBASIC17.62■□□□□ 0.41
Cdh4P39038 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.62■□□□□ 0.41
Cdh4P39038 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdh4P39038 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cdh4P39038 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh4P39038 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.62■□□□□ 0.41
Cdh4P39038 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh4P39038 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Cdh4P39038 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh4P39038 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh4P39038 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.62■□□□□ 0.41
Cdh4P39038 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh4P39038 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdh4P39038 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh4P39038 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh4P39038 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh4P39038 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh4P39038 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh4P39038 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cdh4P39038 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh4P39038 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh4P39038 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh4P39038 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cdh4P39038 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cdh4P39038 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Cdh4P39038 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh4P39038 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh4P39038 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cdh4P39038 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh4P39038 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh4P39038 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh4P39038 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Cdh4P39038 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh4P39038 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cdh4P39038 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cdh4P39038 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdh4P39038 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh4P39038 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh4P39038 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh4P39038 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh4P39038 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh4P39038 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh4P39038 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh4P39038 Gm13148-201ENSMUST00000118892 745 ntBASIC17.6■□□□□ 0.41
Cdh4P39038 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh4P39038 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cdh4P39038 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdh4P39038 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh4P39038 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh4P39038 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh4P39038 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.59■□□□□ 0.41
Cdh4P39038 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh4P39038 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh4P39038 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh4P39038 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.59■□□□□ 0.41
Cdh4P39038 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh4P39038 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh4P39038 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh4P39038 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cdh4P39038 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdh4P39038 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdh4P39038 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdh4P39038 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdh4P39038 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdh4P39038 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.58■□□□□ 0.4
Cdh4P39038 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdh4P39038 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms