Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 Golph3-205ENSMUST00000228671 2842 ntBASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tnfrsf1bP25119 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Gm13148-201ENSMUST00000118892 745 ntBASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tnfrsf1bP25119 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf1bP25119 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf1bP25119 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf1bP25119 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf1bP25119 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf1bP25119 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf1bP25119 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Tnfrsf1bP25119 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Tnfrsf1bP25119 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.08■□□□□ 0.32
Tnfrsf1bP25119 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1bP25119 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1bP25119 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1bP25119 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.08■□□□□ 0.32
Tnfrsf1bP25119 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Tnfrsf1bP25119 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1bP25119 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1bP25119 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.08■□□□□ 0.32
Tnfrsf1bP25119 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.08■□□□□ 0.32
Tnfrsf1bP25119 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1bP25119 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1bP25119 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1bP25119 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tnfrsf1bP25119 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf1bP25119 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.07■□□□□ 0.32
Tnfrsf1bP25119 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Tnfrsf1bP25119 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.07■□□□□ 0.32
Tnfrsf1bP25119 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.07■□□□□ 0.32
Tnfrsf1bP25119 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf1bP25119 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf1bP25119 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf1bP25119 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf1bP25119 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.07■□□□□ 0.32
Tnfrsf1bP25119 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf1bP25119 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tnfrsf1bP25119 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.07■□□□□ 0.32
Tnfrsf1bP25119 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.07■□□□□ 0.32
Tnfrsf1bP25119 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.06■□□□□ 0.32
Tnfrsf1bP25119 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.05■□□□□ 0.32
Tnfrsf1bP25119 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf1bP25119 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf1bP25119 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Tnfrsf1bP25119 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf1bP25119 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Tnfrsf1bP25119 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tnfrsf1bP25119 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms