Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl1P10146 Gm27045-201ENSMUST00000182145 1402 ntBASIC14.38□□□□□ -0.11
Ccl1P10146 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl1P10146 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl1P10146 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccl1P10146 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccl1P10146 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl1P10146 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl1P10146 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.37□□□□□ -0.11
Ccl1P10146 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl1P10146 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl1P10146 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl1P10146 Gm43566-201ENSMUST00000196851 808 ntBASIC14.37□□□□□ -0.11
Ccl1P10146 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.37□□□□□ -0.11
Ccl1P10146 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl1P10146 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl1P10146 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl1P10146 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl1P10146 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl1P10146 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccl1P10146 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl1P10146 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl1P10146 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl1P10146 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl1P10146 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl1P10146 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl1P10146 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.36□□□□□ -0.11
Ccl1P10146 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccl1P10146 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccl1P10146 Fst-202ENSMUST00000223640 2612 ntBASIC14.36□□□□□ -0.11
Ccl1P10146 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccl1P10146 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl1P10146 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Ccl1P10146 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl1P10146 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl1P10146 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl1P10146 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ccl1P10146 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccl1P10146 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Ccl1P10146 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.35□□□□□ -0.11
Ccl1P10146 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccl1P10146 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl1P10146 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccl1P10146 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl1P10146 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl1P10146 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl1P10146 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl1P10146 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl1P10146 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Ccl1P10146 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl1P10146 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Ccl1P10146 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccl1P10146 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ccl1P10146 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl1P10146 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl1P10146 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl1P10146 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl1P10146 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccl1P10146 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccl1P10146 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl1P10146 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl1P10146 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl1P10146 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccl1P10146 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccl1P10146 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl1P10146 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl1P10146 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccl1P10146 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl1P10146 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl1P10146 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl1P10146 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccl1P10146 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccl1P10146 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccl1P10146 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ccl1P10146 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccl1P10146 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl1P10146 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ccl1P10146 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl1P10146 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.33□□□□□ -0.12
Ccl1P10146 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl1P10146 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.33□□□□□ -0.12
Ccl1P10146 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl1P10146 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl1P10146 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl1P10146 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl1P10146 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl1P10146 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl1P10146 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl1P10146 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl1P10146 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl1P10146 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl1P10146 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.33□□□□□ -0.12
Ccl1P10146 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccl1P10146 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl1P10146 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl1P10146 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccl1P10146 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ccl1P10146 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccl1P10146 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ccl1P10146 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms