Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a5A6H584 Gm29518-201ENSMUST00000190858 372 ntBASIC14.03□□□□□ -0.16
Col6a5A6H584 Birc2-201ENSMUST00000054878 378 ntBASIC14.03□□□□□ -0.16
Col6a5A6H584 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a5A6H584 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Col6a5A6H584 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Col6a5A6H584 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col6a5A6H584 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col6a5A6H584 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a5A6H584 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a5A6H584 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a5A6H584 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a5A6H584 Mir8098-201ENSMUST00000184011 137 ntBASIC14.03□□□□□ -0.16
Col6a5A6H584 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a5A6H584 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col6a5A6H584 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col6a5A6H584 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a5A6H584 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a5A6H584 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a5A6H584 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col6a5A6H584 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a5A6H584 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a5A6H584 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a5A6H584 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col6a5A6H584 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a5A6H584 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.02□□□□□ -0.17
Col6a5A6H584 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.02□□□□□ -0.17
Col6a5A6H584 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a5A6H584 Mir5130-201ENSMUST00000175160 84 ntBASIC14.02□□□□□ -0.17
Col6a5A6H584 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.02□□□□□ -0.17
Col6a5A6H584 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col6a5A6H584 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a5A6H584 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a5A6H584 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a5A6H584 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col6a5A6H584 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a5A6H584 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.01□□□□□ -0.17
Col6a5A6H584 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.01□□□□□ -0.17
Col6a5A6H584 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a5A6H584 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a5A6H584 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a5A6H584 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a5A6H584 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Col6a5A6H584 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a5A6H584 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a5A6H584 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a5A6H584 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.01□□□□□ -0.17
Col6a5A6H584 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col6a5A6H584 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a5A6H584 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col6a5A6H584 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.01□□□□□ -0.17
Col6a5A6H584 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a5A6H584 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a5A6H584 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a5A6H584 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.01□□□□□ -0.17
Col6a5A6H584 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col6a5A6H584 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col6a5A6H584 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a5A6H584 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a5A6H584 Gm38027-201ENSMUST00000192315 235 ntBASIC14□□□□□ -0.17
Col6a5A6H584 Gm5864-201ENSMUST00000202263 970 ntBASIC14□□□□□ -0.17
Col6a5A6H584 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14□□□□□ -0.17
Col6a5A6H584 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a5A6H584 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col6a5A6H584 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Col6a5A6H584 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14□□□□□ -0.17
Col6a5A6H584 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a5A6H584 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a5A6H584 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col6a5A6H584 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14□□□□□ -0.17
Col6a5A6H584 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a5A6H584 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Col6a5A6H584 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col6a5A6H584 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Col6a5A6H584 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a5A6H584 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.99□□□□□ -0.17
Col6a5A6H584 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC13.99□□□□□ -0.17
Col6a5A6H584 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a5A6H584 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a5A6H584 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a5A6H584 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Col6a5A6H584 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a5A6H584 Mir3081-201ENSMUST00000175305 84 ntBASIC13.99□□□□□ -0.17
Col6a5A6H584 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a5A6H584 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a5A6H584 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a5A6H584 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a5A6H584 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a5A6H584 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a5A6H584 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col6a5A6H584 Gm18733-201ENSMUST00000173950 856 ntBASIC13.98□□□□□ -0.17
Col6a5A6H584 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a5A6H584 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a5A6H584 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a5A6H584 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a5A6H584 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a5A6H584 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a5A6H584 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a5A6H584 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col6a5A6H584 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms