Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gm18671-201ENSMUST00000214826 683 ntBASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv17A0A140T8P8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv17A0A140T8P8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.12□□□□□ -0.15
Trbv17A0A140T8P8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 Gm18284-201ENSMUST00000172604 624 ntBASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv17A0A140T8P8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv17A0A140T8P8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv17A0A140T8P8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trbv17A0A140T8P8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv17A0A140T8P8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv17A0A140T8P8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv17A0A140T8P8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv17A0A140T8P8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.09□□□□□ -0.15
Trbv17A0A140T8P8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.09□□□□□ -0.15
Trbv17A0A140T8P8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.09□□□□□ -0.15
Trbv17A0A140T8P8 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trbv17A0A140T8P8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv17A0A140T8P8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms