Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Gm32699-201ENSMUST00000221728 1988 ntBASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav9d-4A0A0G2JG37 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9d-4A0A0G2JG37 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Gm5522-201ENSMUST00000189483 1242 ntBASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav9d-4A0A0G2JG37 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9d-4A0A0G2JG37 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav9d-4A0A0G2JG37 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-4A0A0G2JG37 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-4A0A0G2JG37 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.65□□□□□ -0.38
Trav9d-4A0A0G2JG37 Gm27045-201ENSMUST00000182145 1402 ntBASIC12.65□□□□□ -0.38
Trav9d-4A0A0G2JG37 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-4A0A0G2JG37 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-4A0A0G2JG37 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav9d-4A0A0G2JG37 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-4A0A0G2JG37 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-4A0A0G2JG37 Gm5812-201ENSMUST00000061073 957 ntBASIC12.65□□□□□ -0.38
Trav9d-4A0A0G2JG37 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav9d-4A0A0G2JG37 Gm15853-202ENSMUST00000195518 2041 ntBASIC12.65□□□□□ -0.38
Trav9d-4A0A0G2JG37 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-4A0A0G2JG37 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-4A0A0G2JG37 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9d-4A0A0G2JG37 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav9d-4A0A0G2JG37 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Trav9d-4A0A0G2JG37 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav9d-4A0A0G2JG37 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav9d-4A0A0G2JG37 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms