Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-28A0A0G2JE47 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-28A0A0G2JE47 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-28A0A0G2JE47 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-28A0A0G2JE47 AC121598.2-201ENSMUST00000228376 2325 ntBASIC11.6□□□□□ -0.55
Igkv8-28A0A0G2JE47 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-28A0A0G2JE47 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Igkv8-28A0A0G2JE47 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-28A0A0G2JE47 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-28A0A0G2JE47 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-28A0A0G2JE47 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC11.6□□□□□ -0.55
Igkv8-28A0A0G2JE47 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-28A0A0G2JE47 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv8-28A0A0G2JE47 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Gm10399-202ENSMUST00000202768 748 ntBASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv8-28A0A0G2JE47 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Igkv8-28A0A0G2JE47 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Igkv8-28A0A0G2JE47 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Gm43213-201ENSMUST00000151866 1790 ntBASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC11.58□□□□□ -0.56
Igkv8-28A0A0G2JE47 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Gm5898-201ENSMUST00000121016 2071 ntBASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Gm32699-201ENSMUST00000221728 1988 ntBASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Igkv8-28A0A0G2JE47 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms