Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Igkv5-43A0A0B4J1J2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Igkv5-43A0A0B4J1J2 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.93■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv5-43A0A0B4J1J2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Igkv5-43A0A0B4J1J2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Flg-201ENSMUST00000050758 1488 ntBASIC18.92■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Gm11927-201ENSMUST00000118472 759 ntBASIC18.92■□□□□ 0.62
Igkv5-43A0A0B4J1J2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.92■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.92■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Gm22240-201ENSMUST00000175225 82 ntBASIC18.91■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igkv5-43A0A0B4J1J2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.91■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv5-43A0A0B4J1J2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.9■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Gm5643-201ENSMUST00000117081 966 ntBASIC18.9■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv5-43A0A0B4J1J2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.9■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Zfp783-201ENSMUST00000095946 670 ntBASIC18.9■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.9■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Igkv5-43A0A0B4J1J2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Igkv5-43A0A0B4J1J2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.89■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.88■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv5-43A0A0B4J1J2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.87■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv5-43A0A0B4J1J2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.86■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv5-43A0A0B4J1J2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.86■□□□□ 0.61
Igkv5-43A0A0B4J1J2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.86■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Gm38285-201ENSMUST00000192928 922 ntBASIC18.86■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Igkv5-43A0A0B4J1J2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms