Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC14.42□□□□□ -0.1
Trbv13-3A0A0B4J1H2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.42□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.42□□□□□ -0.1
Trbv13-3A0A0B4J1H2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Gm10232-201ENSMUST00000089221 720 ntBASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv13-3A0A0B4J1H2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.39□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.39□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv13-3A0A0B4J1H2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-3A0A0B4J1H2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.37□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv13-3A0A0B4J1H2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms