Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Sirpb1bA0A0A6YXN8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.31■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.31■□□□□ 0.2
Sirpb1bA0A0A6YXN8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.31■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1bA0A0A6YXN8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Sirpb1bA0A0A6YXN8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.28■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Gm13234-201ENSMUST00000120010 747 ntBASIC16.27■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.27■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.27■□□□□ 0.2
Sirpb1bA0A0A6YXN8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sirpb1bA0A0A6YXN8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sirpb1bA0A0A6YXN8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sirpb1bA0A0A6YXN8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sirpb1bA0A0A6YXN8 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sirpb1bA0A0A6YXN8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sirpb1bA0A0A6YXN8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Sirpb1bA0A0A6YXN8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1bA0A0A6YXN8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1bA0A0A6YXN8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1bA0A0A6YXN8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1bA0A0A6YXN8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1bA0A0A6YXN8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sirpb1bA0A0A6YXN8 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.26■□□□□ 0.19
Sirpb1bA0A0A6YXN8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms