Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.93■□□□□ 0.3
Trbc1A0A0A6YWV4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbc1A0A0A6YWV4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.93■□□□□ 0.3
Trbc1A0A0A6YWV4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.93■□□□□ 0.3
Trbc1A0A0A6YWV4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbc1A0A0A6YWV4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbc1A0A0A6YWV4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbc1A0A0A6YWV4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbc1A0A0A6YWV4 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbc1A0A0A6YWV4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbc1A0A0A6YWV4 Gm7290-201ENSMUST00000104990 617 ntBASIC16.92■□□□□ 0.3
Trbc1A0A0A6YWV4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.92■□□□□ 0.3
Trbc1A0A0A6YWV4 Gm12918-201ENSMUST00000120234 636 ntBASIC16.92■□□□□ 0.3
Trbc1A0A0A6YWV4 Gm15710-201ENSMUST00000121821 636 ntBASIC16.92■□□□□ 0.3
Trbc1A0A0A6YWV4 Gm5075-201ENSMUST00000196916 622 ntBASIC16.92■□□□□ 0.3
Trbc1A0A0A6YWV4 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.92■□□□□ 0.3
Trbc1A0A0A6YWV4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.92■□□□□ 0.3
Trbc1A0A0A6YWV4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.92■□□□□ 0.3
Trbc1A0A0A6YWV4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbc1A0A0A6YWV4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbc1A0A0A6YWV4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbc1A0A0A6YWV4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbc1A0A0A6YWV4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.91■□□□□ 0.3
Trbc1A0A0A6YWV4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbc1A0A0A6YWV4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trbc1A0A0A6YWV4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Mir5133-201ENSMUST00000174955 77 ntBASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 BC021767-201ENSMUST00000126387 1716 ntBASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbc1A0A0A6YWV4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbc1A0A0A6YWV4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms