Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8-1A0A075B641 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav8-1A0A075B641 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8-1A0A075B641 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav8-1A0A075B641 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8-1A0A075B641 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8-1A0A075B641 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8-1A0A075B641 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8-1A0A075B641 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8-1A0A075B641 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8-1A0A075B641 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8-1A0A075B641 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav8-1A0A075B641 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav8-1A0A075B641 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Gm16464-201ENSMUST00000117815 1095 ntBASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Mir6236-201ENSMUST00000184437 123 ntBASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Nsd1-203ENSMUST00000224156 1149 ntBASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav8-1A0A075B641 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav8-1A0A075B641 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav8-1A0A075B641 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8-1A0A075B641 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8-1A0A075B641 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8-1A0A075B641 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav8-1A0A075B641 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav8-1A0A075B641 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav8-1A0A075B641 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms