Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8n-2A0A075B633 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8n-2A0A075B633 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8n-2A0A075B633 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav8n-2A0A075B633 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Trav8n-2A0A075B633 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.95■□□□□ 0.3
Trav8n-2A0A075B633 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8n-2A0A075B633 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav8n-2A0A075B633 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8n-2A0A075B633 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.95■□□□□ 0.3
Trav8n-2A0A075B633 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav8n-2A0A075B633 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Gm6433-201ENSMUST00000118634 875 ntBASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Gm10138-203ENSMUST00000206952 366 ntBASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav8n-2A0A075B633 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 Zfp783-201ENSMUST00000095946 670 ntBASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav8n-2A0A075B633 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8n-2A0A075B633 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8n-2A0A075B633 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8n-2A0A075B633 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8n-2A0A075B633 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8n-2A0A075B633 Gm43799-201ENSMUST00000201845 579 ntBASIC16.92■□□□□ 0.3
Trav8n-2A0A075B633 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.92■□□□□ 0.3
Trav8n-2A0A075B633 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav8n-2A0A075B633 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Trav8n-2A0A075B633 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.9■□□□□ 0.3
Trav8n-2A0A075B633 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav8n-2A0A075B633 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8n-2A0A075B633 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav8n-2A0A075B633 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8n-2A0A075B633 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.9■□□□□ 0.3
Trav8n-2A0A075B633 Gm43183-201ENSMUST00000200632 547 ntBASIC16.9■□□□□ 0.3
Trav8n-2A0A075B633 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8n-2A0A075B633 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8n-2A0A075B633 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trav8n-2A0A075B633 Mtag2-201ENSMUST00000058665 714 ntBASIC16.9■□□□□ 0.3
Trav8n-2A0A075B633 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8n-2A0A075B633 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8n-2A0A075B633 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trav8n-2A0A075B633 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trav8n-2A0A075B633 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trav8n-2A0A075B633 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trav8n-2A0A075B633 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8n-2A0A075B633 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.89■□□□□ 0.29
Trav8n-2A0A075B633 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8n-2A0A075B633 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8n-2A0A075B633 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav8n-2A0A075B633 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav8n-2A0A075B633 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms