Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-5A0A075B604 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.15■□□□□ 0.02
Trav7n-5A0A075B604 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-5A0A075B604 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav7n-5A0A075B604 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-5A0A075B604 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-5A0A075B604 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-5A0A075B604 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav7n-5A0A075B604 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav7n-5A0A075B604 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav7n-5A0A075B604 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Gm5408-201ENSMUST00000197998 747 ntBASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav7n-5A0A075B604 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 Gm26524-201ENSMUST00000192339 390 ntBASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 Rab3c-203ENSMUST00000224180 967 ntBASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav7n-5A0A075B604 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 Gm22325-201ENSMUST00000158904 308 ntBASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav7n-5A0A075B604 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav7n-5A0A075B604 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms