Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Rnu11-201ENSMUST00000104135 134 ntBASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Mir7056-201ENSMUST00000183776 59 ntBASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 AC154595.1-201ENSMUST00000225533 1059 ntBASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 AC139197.1-201ENSMUST00000228332 813 ntBASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Olfr559-201ENSMUST00000084816 1022 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Olfr686-204ENSMUST00000216613 2613 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC7.05□□□□□ -1.28
Col6a3E9PWQ3 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Gm18726-201ENSMUST00000218175 2010 ntBASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Dhx30-219ENSMUST00000199529 4373 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 6030443J06Rik-203ENSMUST00000181764 4299 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Gm14520-201ENSMUST00000119258 387 ntBASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Gm3266-201ENSMUST00000217832 591 ntBASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Gm17849-201ENSMUST00000219788 853 ntBASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Gm16020-201ENSMUST00000084281 210 ntBASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Gm5120-201ENSMUST00000215231 2414 ntBASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Lmbrd1-206ENSMUST00000191471 4453 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Gm4992-201ENSMUST00000120256 768 ntBASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Gm37669-201ENSMUST00000192184 820 ntBASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 AC022775.1-201ENSMUST00000228163 2698 ntBASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Gm44080-201ENSMUST00000204451 2214 ntBASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Gm9519-201ENSMUST00000206108 1337 ntBASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Epn2-212ENSMUST00000178202 4317 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Kcnj10-201ENSMUST00000056136 5407 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col6a3E9PWQ3 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC7.03□□□□□ -1.28
Col6a3E9PWQ3 Mir1188-201ENSMUST00000116756 120 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms