Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Upk3aQ9JKX8 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.07□□□□□ -1.28
Upk3aQ9JKX8 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Upk3aQ9JKX8 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Upk3aQ9JKX8 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Upk3aQ9JKX8 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Upk3aQ9JKX8 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC7.07□□□□□ -1.28
Upk3aQ9JKX8 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm37067-201ENSMUST00000195730 1628 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Plac1-202ENSMUST00000114843 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm15203-201ENSMUST00000117668 455 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm11371-201ENSMUST00000120294 385 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Obox4-ps36-201ENSMUST00000177206 723 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Obox4-ps16-201ENSMUST00000177624 1137 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Obox4-ps17-201ENSMUST00000178341 1137 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Obox4-ps18-201ENSMUST00000179441 1137 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm21430-201ENSMUST00000182998 998 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm3121-201ENSMUST00000187086 406 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm36928-201ENSMUST00000192466 694 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm37325-201ENSMUST00000194971 694 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm42938-201ENSMUST00000198414 1072 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm43905-201ENSMUST00000204516 204 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 AC120002.1-201ENSMUST00000218456 331 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm18503-201ENSMUST00000220340 728 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 CT030182.4-201ENSMUST00000223647 645 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 CT009728.1-201ENSMUST00000225228 1050 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 AV026068-229ENSMUST00000225516 595 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm22504-201ENSMUST00000082963 139 ntBASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
Upk3aQ9JKX8 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Odf2-206ENSMUST00000113759 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 AC156645.1-201ENSMUST00000223066 5194 ntBASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Gm13130-201ENSMUST00000119195 1166 ntBASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Gm12459-201ENSMUST00000120659 356 ntBASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Mir7011-201ENSMUST00000183768 73 ntBASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Upk3aQ9JKX8 Gm33248-201ENSMUST00000205836 617 ntTSL 3 BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms