Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm13414-201ENSMUST00000117516 727 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gm8916-201ENSMUST00000119732 949 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gm15007-201ENSMUST00000119982 710 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gm25047-201ENSMUST00000122667 104 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gm26184-201ENSMUST00000157686 131 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gm28117-201ENSMUST00000188472 371 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gm43774-201ENSMUST00000196327 878 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gm5655-201ENSMUST00000221078 901 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 AC154785.1-201ENSMUST00000223280 572 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gm5250-201ENSMUST00000059065 321 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Slc2a2-201ENSMUST00000029240 5569 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Lyve1-201ENSMUST00000033050 2893 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
NpcdF8VQB8 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Ulk4-201ENSMUST00000051479 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 AC117656.3-203ENSMUST00000225007 1809 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gm11412-201ENSMUST00000144875 2800 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Tdpoz1-201ENSMUST00000094413 2237 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
NpcdF8VQB8 AC155298.3-201ENSMUST00000225307 3220 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gm5182-201ENSMUST00000217708 6092 ntBASIC9.35□□□□□ -0.91
NpcdF8VQB8 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Klhl5-201ENSMUST00000101191 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
NpcdF8VQB8 Gm11868-201ENSMUST00000121594 1478 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Ece2-208ENSMUST00000120394 3432 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
NpcdF8VQB8 C5ar2-202ENSMUST00000171425 3381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Il1rl1-203ENSMUST00000173514 2661 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm38263-201ENSMUST00000195879 3059 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gcm2-201ENSMUST00000021791 3073 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Hfe-202ENSMUST00000091706 3572 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Slfn5-202ENSMUST00000108157 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm14739-201ENSMUST00000120424 802 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
NpcdF8VQB8 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm19480-201ENSMUST00000185547 667 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm28335-201ENSMUST00000186204 696 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm28558-201ENSMUST00000187373 696 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm28734-201ENSMUST00000188104 696 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm28968-201ENSMUST00000190413 696 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm38229-201ENSMUST00000191931 696 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Ighv6-2-201ENSMUST00000192430 295 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm8407-201ENSMUST00000192719 427 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm38121-201ENSMUST00000193213 696 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm37991-201ENSMUST00000194297 696 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm38035-201ENSMUST00000194427 696 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm38350-201ENSMUST00000194789 696 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
NpcdF8VQB8 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC9.34□□□□□ -0.91
NpcdF8VQB8 Gm44856-201ENSMUST00000206639 304 ntBASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms