Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Dhx30-204ENSMUST00000196171 3885 ntTSL 5 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Hp1bp3-203ENSMUST00000105825 4618 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Grip1-215ENSMUST00000148954 3293 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Osmr-204ENSMUST00000176826 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Pde4b-201ENSMUST00000030251 1923 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Scrn3-201ENSMUST00000090811 3309 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Dkc1-201ENSMUST00000033776 2804 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Npy5r-201ENSMUST00000070810 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Cd99l2-203ENSMUST00000114586 3459 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Trappc12-202ENSMUST00000168129 3230 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Clp1Q99LI9 Zfp229-201ENSMUST00000065871 4525 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
Clp1Q99LI9 CT009515.4-201ENSMUST00000228165 1494 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Stk38l-202ENSMUST00000111644 2274 ntTSL 5 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Plec-209ENSMUST00000089610 14972 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Olfr380-203ENSMUST00000127789 1536 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 AC126251.1-201ENSMUST00000228170 2707 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 Sult2a7-201ENSMUST00000108524 897 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Gm12222-201ENSMUST00000121368 260 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Gm24960-201ENSMUST00000157923 90 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Gm20689-201ENSMUST00000176033 279 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Gm9381-201ENSMUST00000182285 1012 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Gm18254-201ENSMUST00000185699 1204 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 Gm43390-201ENSMUST00000196614 421 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Gm29759-201ENSMUST00000205860 327 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 CT485612.1-201ENSMUST00000222555 382 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 CT010472.1-201ENSMUST00000224000 704 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 AC140210.1-201ENSMUST00000224961 534 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Mir135b-201ENSMUST00000083501 97 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Syt11-201ENSMUST00000090945 4567 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Gpr85-203ENSMUST00000115492 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Clp1Q99LI9 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC8.51□□□□□ -1.05
Clp1Q99LI9 AC154482.1-201ENSMUST00000223248 2483 ntBASIC8.51□□□□□ -1.05
Clp1Q99LI9 Ubap2l-220ENSMUST00000199834 3494 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Clasp1-221ENSMUST00000191823 3916 ntTSL 5 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Xpnpep3-201ENSMUST00000041609 3236 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Cd22-203ENSMUST00000186154 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 AC124675.1-201ENSMUST00000226263 1390 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Clasp1-205ENSMUST00000185405 4597 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 AC107232.1-201ENSMUST00000227785 1503 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Dubr-205ENSMUST00000191079 2105 ntTSL 2 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm42759-201ENSMUST00000195915 2439 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Plekhh1-204ENSMUST00000219956 5229 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm19409-201ENSMUST00000198244 2858 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Ccdc36-201ENSMUST00000076592 2890 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm37699-201ENSMUST00000194753 3338 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Nefm-201ENSMUST00000022638 3334 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Trpc7-202ENSMUST00000109871 3519 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm12870-201ENSMUST00000121383 1016 ntBASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC8.5□□□□□ -1.05
Clp1Q99LI9 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms