Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm5528-201ENSMUST00000076314 480 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm22748-201ENSMUST00000082493 136 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 Gpr89-201ENSMUST00000029738 4598 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC8.7□□□□□ -1.02
Col1a1P11087 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 Synj2-201ENSMUST00000061091 4072 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC8.7□□□□□ -1.02
Col1a1P11087 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC8.7□□□□□ -1.02
Col1a1P11087 Wwp1-202ENSMUST00000108246 6440 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm25498-201ENSMUST00000104424 129 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm12468-201ENSMUST00000116189 404 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm6654-201ENSMUST00000118950 348 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC8.7□□□□□ -1.02
Col1a1P11087 AC117240.1-201ENSMUST00000199436 61 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm44896-201ENSMUST00000206190 772 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 AC152922.1-201ENSMUST00000216518 1232 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC8.7□□□□□ -1.02
Col1a1P11087 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Col1a1P11087 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Col1a1P11087 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 Olfr1124-202ENSMUST00000215909 2422 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Col1a1P11087 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Col1a1P11087 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 Piwil4-203ENSMUST00000115644 3304 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Col1a1P11087 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Col1a1P11087 Gm37120-201ENSMUST00000193350 5959 ntBASIC8.69□□□□□ -1.02
Col1a1P11087 Gm24519-201ENSMUST00000104507 132 ntBASIC8.69□□□□□ -1.02
Col1a1P11087 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
Col1a1P11087 Gm11370-201ENSMUST00000120583 260 ntBASIC8.69□□□□□ -1.02
Col1a1P11087 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC8.69□□□□□ -1.02
Col1a1P11087 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Col1a1P11087 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC8.69□□□□□ -1.02
Col1a1P11087 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC8.69□□□□□ -1.02
Col1a1P11087 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 Gm37620-201ENSMUST00000192910 501 ntBASIC8.69□□□□□ -1.02
Col1a1P11087 Gm30517-201ENSMUST00000197350 772 ntBASIC8.69□□□□□ -1.02
Col1a1P11087 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Col1a1P11087 Gm4751-201ENSMUST00000200620 1105 ntBASIC8.69□□□□□ -1.02
Col1a1P11087 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC8.69□□□□□ -1.02
Col1a1P11087 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC8.69□□□□□ -1.02
Col1a1P11087 AC124778.1-201ENSMUST00000216013 162 ntBASIC8.69□□□□□ -1.02
Col1a1P11087 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC8.69□□□□□ -1.02
Col1a1P11087 Gm35638-201ENSMUST00000220724 652 ntBASIC8.69□□□□□ -1.02
Col1a1P11087 Gm7986-201ENSMUST00000221336 551 ntBASIC8.69□□□□□ -1.02
Col1a1P11087 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.69□□□□□ -1.02
Col1a1P11087 CT009556.4-201ENSMUST00000227092 200 ntBASIC8.69□□□□□ -1.02
Col1a1P11087 AC123665.3-201ENSMUST00000228735 1216 ntBASIC8.69□□□□□ -1.02
Col1a1P11087 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC8.69□□□□□ -1.02
Col1a1P11087 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Col1a1P11087 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Col1a1P11087 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Col1a1P11087 Gm12346-201ENSMUST00000121455 2255 ntBASIC8.69□□□□□ -1.02
Col1a1P11087 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Col1a1P11087 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 Cracr2a-203ENSMUST00000212051 7625 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Col1a1P11087 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col1a1P11087 Gm37139-201ENSMUST00000192134 4419 ntBASIC8.68□□□□□ -1.02
Col1a1P11087 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC8.68□□□□□ -1.02
Col1a1P11087 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 Arhgap19-202ENSMUST00000163265 5058 ntTSL 5 BASIC8.68□□□□□ -1.02
Col1a1P11087 Sulf1-205ENSMUST00000186051 4563 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col1a1P11087 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms