Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cntn3Q07409 Ntsr1-201ENSMUST00000029084 3917 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cntn3Q07409 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cntn3Q07409 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cntn3Q07409 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm24472-201ENSMUST00000104484 132 ntBASIC8.34□□□□□ -1.07
Cntn3Q07409 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cntn3Q07409 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm11483-201ENSMUST00000119839 247 ntBASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC8.34□□□□□ -1.07
Cntn3Q07409 Mir1962-201ENSMUST00000157516 121 ntBASIC8.34□□□□□ -1.07
Cntn3Q07409 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Cntn3Q07409 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC8.34□□□□□ -1.07
Cntn3Q07409 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Cntn3Q07409 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm5839-201ENSMUST00000182835 1007 ntBASIC8.34□□□□□ -1.07
Cntn3Q07409 Mir7029-201ENSMUST00000184777 61 ntBASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm28437-201ENSMUST00000190277 783 ntBASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm20915-201ENSMUST00000191575 663 ntBASIC8.34□□□□□ -1.07
Cntn3Q07409 Mir7230-201ENSMUST00000195977 56 ntBASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm6366-201ENSMUST00000198766 826 ntBASIC8.34□□□□□ -1.07
Cntn3Q07409 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC8.34□□□□□ -1.07
Cntn3Q07409 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC8.34□□□□□ -1.07
Cntn3Q07409 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC8.34□□□□□ -1.07
Cntn3Q07409 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC8.34□□□□□ -1.07
Cntn3Q07409 AL713985.1-201ENSMUST00000219030 420 ntBASIC8.34□□□□□ -1.07
Cntn3Q07409 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cntn3Q07409 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Cntn3Q07409 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Cntn3Q07409 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm6807-201ENSMUST00000077435 888 ntBASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm25799-201ENSMUST00000082643 107 ntBASIC8.34□□□□□ -1.07
Cntn3Q07409 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Cntn3Q07409 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC8.34□□□□□ -1.07
Cntn3Q07409 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Cntn3Q07409 Olfr654-203ENSMUST00000213984 3063 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
Cntn3Q07409 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC8.34□□□□□ -1.07
Cntn3Q07409 CU024890.1-201ENSMUST00000221361 2019 ntBASIC8.34□□□□□ -1.07
Cntn3Q07409 Gm38105-201ENSMUST00000192112 2621 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Cntn3Q07409 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cntn3Q07409 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cntn3Q07409 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cntn3Q07409 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC8.33□□□□□ -1.08
Cntn3Q07409 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Cntn3Q07409 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC8.33□□□□□ -1.08
Cntn3Q07409 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Cntn3Q07409 Gm8107-201ENSMUST00000117477 2009 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 Gm13750-201ENSMUST00000117621 465 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 Gm12687-201ENSMUST00000119752 706 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 Gm14328-201ENSMUST00000122178 408 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cntn3Q07409 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cntn3Q07409 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC8.33□□□□□ -1.08
Cntn3Q07409 Gm22693-201ENSMUST00000175049 442 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 Mir7011-201ENSMUST00000183768 73 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 Gm37956-201ENSMUST00000195208 2010 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 Gm34144-201ENSMUST00000197039 259 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC8.33□□□□□ -1.08
Cntn3Q07409 Gm43895-201ENSMUST00000203219 855 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 Gm43905-201ENSMUST00000204516 204 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC8.33□□□□□ -1.08
Cntn3Q07409 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cntn3Q07409 Gm18243-201ENSMUST00000220756 887 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 Gm40598-201ENSMUST00000222953 547 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cntn3Q07409 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cntn3Q07409 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cntn3Q07409 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Cntn3Q07409 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cntn3Q07409 Gm25259-201ENSMUST00000083048 193 ntBASIC8.33□□□□□ -1.08
Cntn3Q07409 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cntn3Q07409 Fhl1-205ENSMUST00000114773 2298 ntTSL 5 BASIC8.33□□□□□ -1.08
Cntn3Q07409 Pax9-201ENSMUST00000001538 4166 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cntn3Q07409 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC8.33□□□□□ -1.08
Cntn3Q07409 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Cntn3Q07409 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cntn3Q07409 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Cntn3Q07409 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Limch1-203ENSMUST00000117601 3157 ntTSL 5 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Zfat-202ENSMUST00000160248 3866 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Fam83b-202ENSMUST00000183437 3879 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Ncr1-202ENSMUST00000126417 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Cntn3Q07409 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Cntn3Q07409 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms