Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Col16a1Q8BLX7 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col16a1Q8BLX7 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC9.71□□□□□ -0.85
Col16a1Q8BLX7 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC9.71□□□□□ -0.85
Col16a1Q8BLX7 Gm25395-201ENSMUST00000157343 272 ntBASIC9.71□□□□□ -0.85
Col16a1Q8BLX7 Ighv1-14-201ENSMUST00000194015 402 ntBASIC9.71□□□□□ -0.85
Col16a1Q8BLX7 Gm24826-202ENSMUST00000197298 216 ntBASIC9.71□□□□□ -0.85
Col16a1Q8BLX7 Gm18995-201ENSMUST00000202981 520 ntBASIC9.71□□□□□ -0.85
Col16a1Q8BLX7 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.85
Col16a1Q8BLX7 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC9.71□□□□□ -0.85
Col16a1Q8BLX7 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC9.71□□□□□ -0.85
Col16a1Q8BLX7 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Col16a1Q8BLX7 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Col16a1Q8BLX7 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Col16a1Q8BLX7 Ttf2-201ENSMUST00000076941 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Rimbp2-205ENSMUST00000199537 6966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Gm44883-201ENSMUST00000206063 3258 ntBASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Gm37159-201ENSMUST00000192720 3605 ntBASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Gm12451-201ENSMUST00000121636 633 ntBASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Gm13669-201ENSMUST00000122366 457 ntBASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Gm2709-201ENSMUST00000142979 350 ntBASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Mir3078-201ENSMUST00000175231 87 ntBASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 AC127242.3-201ENSMUST00000222009 580 ntBASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Gm36758-201ENSMUST00000222594 310 ntBASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 AC165157.1-201ENSMUST00000222981 580 ntBASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Gm2754-201ENSMUST00000223383 589 ntBASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 AC166574.3-201ENSMUST00000226725 367 ntBASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Gm22748-201ENSMUST00000082493 136 ntBASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Col16a1Q8BLX7 Fndc1-202ENSMUST00000097425 5845 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Zfp780b-203ENSMUST00000205874 1907 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Gm26645-201ENSMUST00000181076 1316 ntBASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Gm9144-201ENSMUST00000101625 1008 ntBASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Gm11445-201ENSMUST00000119101 532 ntBASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Gm12844-201ENSMUST00000119463 582 ntBASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Gm38068-201ENSMUST00000192546 540 ntBASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Gm2860-201ENSMUST00000199226 707 ntBASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Col16a1Q8BLX7 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Gm43169-201ENSMUST00000199544 4734 ntBASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 AC138284.3-201ENSMUST00000217345 4663 ntBASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Cacna1c-204ENSMUST00000112793 6669 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Gm4073-201ENSMUST00000176792 3500 ntBASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Tmcc3-202ENSMUST00000117460 3217 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Lamb3-201ENSMUST00000016315 4056 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Col16a1Q8BLX7 Gm25498-201ENSMUST00000104424 129 ntBASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms