Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC5.99□□□□□ -1.45
Sdc1P18828 AC151904.2-201ENSMUST00000218683 1177 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Gm2649-201ENSMUST00000218825 610 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC5.99□□□□□ -1.45
Sdc1P18828 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC5.99□□□□□ -1.45
Sdc1P18828 Gm4257-201ENSMUST00000222877 513 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 AC154461.5-201ENSMUST00000225429 774 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Fgf21-201ENSMUST00000033099 951 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Sdc1P18828 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Sdc1P18828 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Sdc1P18828 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Sdc1P18828 AC165080.3-201ENSMUST00000217162 3116 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 CU024890.1-201ENSMUST00000221361 2019 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Sdc1P18828 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC5.99□□□□□ -1.45
Sdc1P18828 CT009604.1-201ENSMUST00000223900 1328 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 AC122263.1-201ENSMUST00000228636 2805 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Gm44704-201ENSMUST00000208963 1990 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Gm1982-201ENSMUST00000188615 1887 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
Sdc1P18828 AC022682.2-202ENSMUST00000224394 3943 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm37460-201ENSMUST00000191796 2249 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC5.98□□□□□ -1.45
Sdc1P18828 AC139754.2-201ENSMUST00000218037 1455 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 AC122024.1-201ENSMUST00000219276 4850 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Gm37043-201ENSMUST00000194609 3105 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 CT010577.1-202ENSMUST00000226187 1903 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC5.98□□□□□ -1.45
Sdc1P18828 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm27509-201ENSMUST00000102400 79 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm15355-201ENSMUST00000118929 285 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC5.98□□□□□ -1.45
Sdc1P18828 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm23479-201ENSMUST00000158876 122 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm8868-201ENSMUST00000173591 577 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 1110059E24Rik-202ENSMUST00000177577 599 ntTSL 3 BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm19402-201ENSMUST00000180297 801 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Sdc1P18828 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Gm7560-201ENSMUST00000187748 873 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Gm28193-201ENSMUST00000189863 615 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Gm29517-201ENSMUST00000190744 351 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Gm36935-201ENSMUST00000192526 292 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Gm37371-201ENSMUST00000194837 392 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm9710-201ENSMUST00000198053 499 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Gm7285-201ENSMUST00000198801 580 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Gm27680-202ENSMUST00000199221 807 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC5.98□□□□□ -1.45
Sdc1P18828 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC5.98□□□□□ -1.45
Sdc1P18828 CT033774.2-201ENSMUST00000222079 256 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 AC123058.1-201ENSMUST00000223748 437 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Borcs8-201ENSMUST00000002418 810 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Olfr770-201ENSMUST00000062314 936 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Sdc1P18828 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 AC116476.1-201ENSMUST00000226274 2318 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Gm18901-201ENSMUST00000197840 1444 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm37429-201ENSMUST00000193807 1799 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm42930-201ENSMUST00000200872 3260 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm11756-201ENSMUST00000107310 1312 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
Sdc1P18828 Gm38288-201ENSMUST00000195330 1320 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Sdc1P18828 CT025548.2-201ENSMUST00000226227 1329 ntBASIC5.98□□□□□ -1.45
Sdc1P18828 Gm37183-201ENSMUST00000191712 3405 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms