Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Gm43612-201ENSMUST00000196087 3207 ntBASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Gm7441-201ENSMUST00000220697 1074 ntBASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Adtrp-201ENSMUST00000072012 2440 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Npy2r-204ENSMUST00000182831 1689 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Oca2-201ENSMUST00000032633 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Col6a3E9PWQ3 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Gm13579-201ENSMUST00000118519 517 ntBASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Gm2325-201ENSMUST00000186637 581 ntBASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Gm6137-201ENSMUST00000187552 578 ntBASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Epn2-202ENSMUST00000108711 4287 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Stmn2-201ENSMUST00000029002 2073 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Gm4279-201ENSMUST00000154314 2329 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Csf3r-202ENSMUST00000106162 3481 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Gm20749-201ENSMUST00000186319 3492 ntBASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Gm12242-201ENSMUST00000118824 738 ntBASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Gm12630-201ENSMUST00000121575 784 ntBASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Gm3008-201ENSMUST00000160566 571 ntBASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Gm8192-201ENSMUST00000182196 958 ntBASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Gm26970-201ENSMUST00000182990 964 ntBASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Gm36961-201ENSMUST00000191980 132 ntBASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Dkc1-201ENSMUST00000033776 2804 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Col6a3E9PWQ3 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Gm43062-201ENSMUST00000196302 1319 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 5330411O13Rik-201ENSMUST00000205759 1544 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Gm5970-201ENSMUST00000131638 1216 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Gm6522-201ENSMUST00000197160 1203 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Gm18007-201ENSMUST00000205019 844 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 AC154522.1-201ENSMUST00000224647 1903 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Dalir-201ENSMUST00000188773 2170 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Pla2g16-201ENSMUST00000025925 3523 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Gm11256-201ENSMUST00000118109 829 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Gm12202-201ENSMUST00000121196 811 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Mir5121-201ENSMUST00000198528 74 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Gm20072-201ENSMUST00000202231 292 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 AC122290.1-201ENSMUST00000225631 1078 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Gm26442-201ENSMUST00000082588 153 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Mdga2-212ENSMUST00000222987 1388 ntTSL 5 BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Col6a3E9PWQ3 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms