Protein–RNA interactions for Protein: Q9R0S3

Mmp17, Matrix metalloproteinase-17, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp17Q9R0S3 Zfp783-201ENSMUST00000095946 670 ntBASIC17.24■□□□□ 0.35
Mmp17Q9R0S3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp17Q9R0S3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp17Q9R0S3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp17Q9R0S3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp17Q9R0S3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mmp17Q9R0S3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp17Q9R0S3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Mmp17Q9R0S3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp17Q9R0S3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp17Q9R0S3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp17Q9R0S3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp17Q9R0S3 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Mmp17Q9R0S3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.23■□□□□ 0.35
Mmp17Q9R0S3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Mmp17Q9R0S3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp17Q9R0S3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp17Q9R0S3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp17Q9R0S3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mmp17Q9R0S3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp17Q9R0S3 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.22■□□□□ 0.35
Mmp17Q9R0S3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp17Q9R0S3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Mmp17Q9R0S3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Mmp17Q9R0S3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp17Q9R0S3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp17Q9R0S3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp17Q9R0S3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp17Q9R0S3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Mmp17Q9R0S3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Mmp17Q9R0S3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Mmp17Q9R0S3 Gm11643-201ENSMUST00000119578 864 ntBASIC17.21■□□□□ 0.35
Mmp17Q9R0S3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.21■□□□□ 0.35
Mmp17Q9R0S3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mmp17Q9R0S3 Mir5122-201ENSMUST00000175004 89 ntBASIC17.21■□□□□ 0.35
Mmp17Q9R0S3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Mmp17Q9R0S3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Mmp17Q9R0S3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Mmp17Q9R0S3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Mmp17Q9R0S3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Mmp17Q9R0S3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 Gm10138-203ENSMUST00000206952 366 ntBASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Mmp17Q9R0S3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp17Q9R0S3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp17Q9R0S3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp17Q9R0S3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp17Q9R0S3 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp17Q9R0S3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp17Q9R0S3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.19■□□□□ 0.34
Mmp17Q9R0S3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.19■□□□□ 0.34
Mmp17Q9R0S3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp17Q9R0S3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp17Q9R0S3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Mmp17Q9R0S3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp17Q9R0S3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp17Q9R0S3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Mmp17Q9R0S3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.18■□□□□ 0.34
Mmp17Q9R0S3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.18■□□□□ 0.34
Mmp17Q9R0S3 Mtag2-201ENSMUST00000058665 714 ntBASIC17.18■□□□□ 0.34
Mmp17Q9R0S3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Mmp17Q9R0S3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp17Q9R0S3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp17Q9R0S3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp17Q9R0S3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp17Q9R0S3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp17Q9R0S3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Mmp17Q9R0S3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp17Q9R0S3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp17Q9R0S3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp17Q9R0S3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Mmp17Q9R0S3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp17Q9R0S3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp17Q9R0S3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp17Q9R0S3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp17Q9R0S3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp17Q9R0S3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Mmp17Q9R0S3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp17Q9R0S3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp17Q9R0S3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp17Q9R0S3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Mmp17Q9R0S3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp17Q9R0S3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Mmp17Q9R0S3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms