Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a2Q9JLR1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a2Q9JLR1 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a2Q9JLR1 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a2Q9JLR1 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.65■□□□□ 0.26
Sec61a2Q9JLR1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Sec61a2Q9JLR1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a2Q9JLR1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.65■□□□□ 0.26
Sec61a2Q9JLR1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.65■□□□□ 0.26
Sec61a2Q9JLR1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Sec61a2Q9JLR1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a2Q9JLR1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sec61a2Q9JLR1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.64■□□□□ 0.25
Sec61a2Q9JLR1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a2Q9JLR1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Sec61a2Q9JLR1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a2Q9JLR1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Sec61a2Q9JLR1 Reep4-203ENSMUST00000226563 1444 ntBASIC16.63■□□□□ 0.25
Sec61a2Q9JLR1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a2Q9JLR1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a2Q9JLR1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a2Q9JLR1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.63■□□□□ 0.25
Sec61a2Q9JLR1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Sec61a2Q9JLR1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a2Q9JLR1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sec61a2Q9JLR1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a2Q9JLR1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sec61a2Q9JLR1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Sec61a2Q9JLR1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a2Q9JLR1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a2Q9JLR1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Sec61a2Q9JLR1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a2Q9JLR1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a2Q9JLR1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
Sec61a2Q9JLR1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a2Q9JLR1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a2Q9JLR1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a2Q9JLR1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a2Q9JLR1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Sec61a2Q9JLR1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a2Q9JLR1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Sec61a2Q9JLR1 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.62■□□□□ 0.25
Sec61a2Q9JLR1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a2Q9JLR1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sec61a2Q9JLR1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Gm42642-201ENSMUST00000200683 355 ntBASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 BC021767-201ENSMUST00000126387 1716 ntBASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sec61a2Q9JLR1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Gm38205-201ENSMUST00000192243 258 ntBASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Gm10033-202ENSMUST00000211874 928 ntBASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sec61a2Q9JLR1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms