Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rhox4bQ9JI43 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rhox4bQ9JI43 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rhox4bQ9JI43 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Rhox4bQ9JI43 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.95□□□□□ -0.02
Rhox4bQ9JI43 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rhox4bQ9JI43 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rhox4bQ9JI43 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.95□□□□□ -0.02
Rhox4bQ9JI43 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Rhox4bQ9JI43 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.95□□□□□ -0.02
Rhox4bQ9JI43 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Rhox4bQ9JI43 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rhox4bQ9JI43 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rhox4bQ9JI43 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rhox4bQ9JI43 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rhox4bQ9JI43 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Rhox4bQ9JI43 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Rhox4bQ9JI43 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rhox4bQ9JI43 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.92□□□□□ -0.02
Rhox4bQ9JI43 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rhox4bQ9JI43 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rhox4bQ9JI43 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rhox4bQ9JI43 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Rhox4bQ9JI43 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rhox4bQ9JI43 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rhox4bQ9JI43 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rhox4bQ9JI43 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rhox4bQ9JI43 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rhox4bQ9JI43 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rhox4bQ9JI43 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Mir6538-201ENSMUST00000183713 110 ntBASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Gm43566-201ENSMUST00000196851 808 ntBASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rhox4bQ9JI43 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rhox4bQ9JI43 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms